Overview
Brought to you by YData
Dataset statistics
| Number of variables | 75 |
|---|---|
| Number of observations | 2733 |
| Missing cells | 17571 |
| Missing cells (%) | 8.6% |
| Duplicate rows | 0 |
| Duplicate rows (%) | 0.0% |
| Total size in memory | 1.6 MiB |
| Average record size in memory | 600.0 B |
Variable types
| Numeric | 7 |
|---|---|
| Categorical | 57 |
| DateTime | 3 |
| Boolean | 8 |
%European(CEU)_df_pinfo_paciente_specimens is highly overall correlated with %European(CEU)_df_race_paciente_specimens and 52 other fields | High correlation |
%European(CEU)_df_race_paciente_specimens is highly overall correlated with %European(CEU)_df_pinfo_paciente_specimens and 52 other fields | High correlation |
%Native and LatinAmerican (NA)_df_pinfo_paciente_specimens is highly overall correlated with %European(CEU)_df_pinfo_paciente_specimens and 59 other fields | High correlation |
%Native and LatinAmerican (NA)_df_race_paciente_specimens is highly overall correlated with %European(CEU)_df_pinfo_paciente_specimens and 59 other fields | High correlation |
%West African(YRI)_df_pinfo_paciente_specimens is highly overall correlated with %European(CEU)_df_pinfo_paciente_specimens and 47 other fields | High correlation |
%West African(YRI)_df_race_paciente_specimens is highly overall correlated with %European(CEU)_df_pinfo_paciente_specimens and 47 other fields | High correlation |
Able to ViablyPassage in nude mice_specimen_specimens is highly overall correlated with %European(CEU)_df_pinfo_paciente_specimens and 41 other fields | High correlation |
AdditionalMedicalHistory_df_pinfo_paciente_specimens is highly overall correlated with %European(CEU)_df_pinfo_paciente_specimens and 56 other fields | High correlation |
Age atDiagnosis_df_pinfo_paciente_specimens is highly overall correlated with %European(CEU)_df_pinfo_paciente_specimens and 52 other fields | High correlation |
Age atSampling_specimen_specimens is highly overall correlated with %European(CEU)_df_pinfo_paciente_specimens and 51 other fields | High correlation |
Best Response_trathistory_paciente_specimens is highly overall correlated with %European(CEU)_df_pinfo_paciente_specimens and 33 other fields | High correlation |
BiologicalSex_df_pinfo_paciente_specimens is highly overall correlated with %European(CEU)_df_pinfo_paciente_specimens and 46 other fields | High correlation |
BiopsySite_specimen_specimens is highly overall correlated with %European(CEU)_df_pinfo_paciente_specimens and 56 other fields | High correlation |
Chr End_gene is highly overall correlated with %European(CEU)_df_pinfo_paciente_specimens and 51 other fields | High correlation |
Chr Start_gene is highly overall correlated with %European(CEU)_df_pinfo_paciente_specimens and 51 other fields | High correlation |
Chr_gene is highly overall correlated with %European(CEU)_df_pinfo_paciente_specimens and 51 other fields | High correlation |
Consensus Whole ExomeSequence Avail_specimen_specimens is highly overall correlated with AdditionalMedicalHistory_df_pinfo_paciente_specimens and 51 other fields | High correlation |
DiagnosisSubtype_df_pinfo_paciente_specimens is highly overall correlated with %European(CEU)_df_pinfo_paciente_specimens and 55 other fields | High correlation |
DiagnosisSubtype_df_race_paciente_specimens is highly overall correlated with %European(CEU)_df_pinfo_paciente_specimens and 55 other fields | High correlation |
DiagnosisSubtype_pathology is highly overall correlated with %European(CEU)_df_pinfo_paciente_specimens and 55 other fields | High correlation |
DiagnosisSubtype_samples is highly overall correlated with %European(CEU)_df_pinfo_paciente_specimens and 55 other fields | High correlation |
DiagnosisSubtype_specimen_specimens is highly overall correlated with %European(CEU)_df_pinfo_paciente_specimens and 55 other fields | High correlation |
DiagnosisSubtype_trathistory_paciente_specimens is highly overall correlated with %European(CEU)_df_pinfo_paciente_specimens and 55 other fields | High correlation |
Ethnicity_df_pinfo_paciente_specimens is highly overall correlated with %European(CEU)_df_pinfo_paciente_specimens and 59 other fields | High correlation |
Existing Variant_gene is highly overall correlated with %European(CEU)_df_pinfo_paciente_specimens and 52 other fields | High correlation |
Grade StageInformation_df_pinfo_paciente_specimens is highly overall correlated with %European(CEU)_df_pinfo_paciente_specimens and 47 other fields | High correlation |
HGVS ProteinChange_gene is highly overall correlated with %European(CEU)_df_pinfo_paciente_specimens and 51 other fields | High correlation |
HGVS cDNAChange_gene is highly overall correlated with %European(CEU)_df_pinfo_paciente_specimens and 51 other fields | High correlation |
Has KnownMetastaticDisease_df_pinfo_paciente_specimens is highly overall correlated with %European(CEU)_df_pinfo_paciente_specimens and 44 other fields | High correlation |
Has Smoked100 Cigarettes_df_pinfo_paciente_specimens is highly overall correlated with %European(CEU)_df_pinfo_paciente_specimens and 50 other fields | High correlation |
HugoSymbol_gene is highly overall correlated with %European(CEU)_df_pinfo_paciente_specimens and 51 other fields | High correlation |
Human PathogenTesting Summary_specimen_specimens is highly overall correlated with %European(CEU)_df_pinfo_paciente_specimens and 47 other fields | High correlation |
InferredAncestry_df_pinfo_paciente_specimens is highly overall correlated with %European(CEU)_df_pinfo_paciente_specimens and 56 other fields | High correlation |
InferredAncestry_df_race_paciente_specimens is highly overall correlated with %European(CEU)_df_pinfo_paciente_specimens and 56 other fields | High correlation |
Inflammatory Cell_pathology is highly overall correlated with %Native and LatinAmerican (NA)_df_pinfo_paciente_specimens and 45 other fields | High correlation |
MSI Status_specimen_specimens is highly overall correlated with AdditionalMedicalHistory_df_pinfo_paciente_specimens and 51 other fields | High correlation |
ModelNotes_specimen_specimens is highly overall correlated with %European(CEU)_df_pinfo_paciente_specimens and 59 other fields | High correlation |
Molecular andIHC Data_df_pinfo_paciente_specimens is highly overall correlated with %European(CEU)_df_pinfo_paciente_specimens and 57 other fields | High correlation |
MutationEffect_gene is highly overall correlated with %European(CEU)_df_pinfo_paciente_specimens and 51 other fields | High correlation |
Necrosis_pathology is highly overall correlated with %Native and LatinAmerican (NA)_df_pinfo_paciente_specimens and 12 other fields | High correlation |
Occupation_df_pinfo_paciente_specimens is highly overall correlated with %European(CEU)_df_pinfo_paciente_specimens and 56 other fields | High correlation |
OncoKB Cancer GenePanel Data Avail_samples is highly overall correlated with %Native and LatinAmerican (NA)_df_pinfo_paciente_specimens and 9 other fields | High correlation |
Oncogenicity_gene is highly overall correlated with %European(CEU)_df_pinfo_paciente_specimens and 51 other fields | High correlation |
PDM Type_pathology is highly overall correlated with %Native and LatinAmerican (NA)_df_pinfo_paciente_specimens and 12 other fields | High correlation |
PDM Type_samples is highly overall correlated with %Native and LatinAmerican (NA)_df_pinfo_paciente_specimens and 9 other fields | High correlation |
PDX GrowthCurve Avail_specimen_specimens is highly overall correlated with AdditionalMedicalHistory_df_pinfo_paciente_specimens and 51 other fields | High correlation |
Passage_pathology is highly overall correlated with %Native and LatinAmerican (NA)_df_pinfo_paciente_specimens and 17 other fields | High correlation |
Passage_samples is highly overall correlated with %Native and LatinAmerican (NA)_df_pinfo_paciente_specimens and 16 other fields | High correlation |
Pathology Notes_pathology is highly overall correlated with %European(CEU)_df_pinfo_paciente_specimens and 48 other fields | High correlation |
PathologyAvail_samples is highly overall correlated with %Native and LatinAmerican (NA)_df_pinfo_paciente_specimens and 22 other fields | High correlation |
Patient ID is highly overall correlated with %European(CEU)_df_pinfo_paciente_specimens and 53 other fields | High correlation |
Patient/OriginatingSpecimen_pathology is highly overall correlated with %Native and LatinAmerican (NA)_df_pinfo_paciente_specimens and 12 other fields | High correlation |
Patient/OriginatingSpecimen_samples is highly overall correlated with %Native and LatinAmerican (NA)_df_pinfo_paciente_specimens and 9 other fields | High correlation |
PatientNotes_df_pinfo_paciente_specimens is highly overall correlated with %European(CEU)_df_pinfo_paciente_specimens and 57 other fields | High correlation |
ProvidedTissue Origin_specimen_specimens is highly overall correlated with %European(CEU)_df_pinfo_paciente_specimens and 49 other fields | High correlation |
RNASeqAvail_samples is highly overall correlated with %Native and LatinAmerican (NA)_df_pinfo_paciente_specimens and 9 other fields | High correlation |
Race_df_pinfo_paciente_specimens is highly overall correlated with %European(CEU)_df_pinfo_paciente_specimens and 52 other fields | High correlation |
Sample ID_gene is highly overall correlated with %European(CEU)_df_pinfo_paciente_specimens and 45 other fields | High correlation |
Sample ID_pathology is highly overall correlated with %European(CEU)_df_pinfo_paciente_specimens and 48 other fields | High correlation |
Sample ID_samples is highly overall correlated with %European(CEU)_df_pinfo_paciente_specimens and 47 other fields | High correlation |
Self-ReportedEthnicity_df_race_paciente_specimens is highly overall correlated with %European(CEU)_df_pinfo_paciente_specimens and 59 other fields | High correlation |
Self-ReportedRace_df_race_paciente_specimens is highly overall correlated with %European(CEU)_df_pinfo_paciente_specimens and 52 other fields | High correlation |
Specimen ID is highly overall correlated with %European(CEU)_df_pinfo_paciente_specimens and 56 other fields | High correlation |
StandardizedRegimen_trathistory_paciente_specimens is highly overall correlated with %Native and LatinAmerican (NA)_df_pinfo_paciente_specimens and 34 other fields | High correlation |
Stromal_pathology is highly overall correlated with %European(CEU)_df_pinfo_paciente_specimens and 31 other fields | High correlation |
Timing_trathistory_paciente_specimens is highly overall correlated with Best Response_trathistory_paciente_specimens and 1 other fields | High correlation |
Total Reads_gene is highly overall correlated with %European(CEU)_df_pinfo_paciente_specimens and 47 other fields | High correlation |
Tumor Content_pathology is highly overall correlated with %Native and LatinAmerican (NA)_df_pinfo_paciente_specimens and 12 other fields | High correlation |
Tumor Grade_pathology is highly overall correlated with %European(CEU)_df_pinfo_paciente_specimens and 43 other fields | High correlation |
Variant AlleleFrequency_gene is highly overall correlated with %European(CEU)_df_pinfo_paciente_specimens and 48 other fields | High correlation |
VariantClass_gene is highly overall correlated with %European(CEU)_df_pinfo_paciente_specimens and 48 other fields | High correlation |
Whole ExomeSequence Avail_samples is highly overall correlated with %Native and LatinAmerican (NA)_df_pinfo_paciente_specimens and 9 other fields | High correlation |
DiagnosisSubtype_trathistory_paciente_specimens is highly imbalanced (76.5%) | Imbalance |
DiagnosisSubtype_df_race_paciente_specimens is highly imbalanced (76.5%) | Imbalance |
Self-ReportedRace_df_race_paciente_specimens is highly imbalanced (72.5%) | Imbalance |
Self-ReportedEthnicity_df_race_paciente_specimens is highly imbalanced (98.8%) | Imbalance |
%European(CEU)_df_race_paciente_specimens is highly imbalanced (73.6%) | Imbalance |
%Native and LatinAmerican (NA)_df_race_paciente_specimens is highly imbalanced (98.8%) | Imbalance |
%West African(YRI)_df_race_paciente_specimens is highly imbalanced (67.8%) | Imbalance |
InferredAncestry_df_race_paciente_specimens is highly imbalanced (77.4%) | Imbalance |
BiologicalSex_df_pinfo_paciente_specimens is highly imbalanced (57.0%) | Imbalance |
DiagnosisSubtype_df_pinfo_paciente_specimens is highly imbalanced (76.5%) | Imbalance |
%European(CEU)_df_pinfo_paciente_specimens is highly imbalanced (73.6%) | Imbalance |
%Native and LatinAmerican (NA)_df_pinfo_paciente_specimens is highly imbalanced (98.8%) | Imbalance |
%West African(YRI)_df_pinfo_paciente_specimens is highly imbalanced (67.8%) | Imbalance |
AdditionalMedicalHistory_df_pinfo_paciente_specimens is highly imbalanced (72.2%) | Imbalance |
Ethnicity_df_pinfo_paciente_specimens is highly imbalanced (98.8%) | Imbalance |
Grade StageInformation_df_pinfo_paciente_specimens is highly imbalanced (56.9%) | Imbalance |
Has Smoked100 Cigarettes_df_pinfo_paciente_specimens is highly imbalanced (74.1%) | Imbalance |
InferredAncestry_df_pinfo_paciente_specimens is highly imbalanced (77.4%) | Imbalance |
Molecular andIHC Data_df_pinfo_paciente_specimens is highly imbalanced (68.5%) | Imbalance |
Occupation_df_pinfo_paciente_specimens is highly imbalanced (58.8%) | Imbalance |
PatientNotes_df_pinfo_paciente_specimens is highly imbalanced (73.3%) | Imbalance |
Race_df_pinfo_paciente_specimens is highly imbalanced (72.5%) | Imbalance |
Specimen ID is highly imbalanced (60.4%) | Imbalance |
BiopsySite_specimen_specimens is highly imbalanced (58.6%) | Imbalance |
DiagnosisSubtype_specimen_specimens is highly imbalanced (76.5%) | Imbalance |
PDX GrowthCurve Avail_specimen_specimens is highly imbalanced (97.7%) | Imbalance |
Consensus Whole ExomeSequence Avail_specimen_specimens is highly imbalanced (97.7%) | Imbalance |
MSI Status_specimen_specimens is highly imbalanced (97.7%) | Imbalance |
Human PathogenTesting Summary_specimen_specimens is highly imbalanced (70.8%) | Imbalance |
Able to ViablyPassage in nude mice_specimen_specimens is highly imbalanced (70.0%) | Imbalance |
ModelNotes_specimen_specimens is highly imbalanced (80.6%) | Imbalance |
DiagnosisSubtype_samples is highly imbalanced (76.5%) | Imbalance |
PathologyAvail_samples is highly imbalanced (95.9%) | Imbalance |
HugoSymbol_gene is highly imbalanced (60.9%) | Imbalance |
Chr_gene is highly imbalanced (60.9%) | Imbalance |
DiagnosisSubtype_pathology is highly imbalanced (76.5%) | Imbalance |
Patient/OriginatingSpecimen_pathology is highly imbalanced (51.3%) | Imbalance |
PDM Type_pathology is highly imbalanced (51.3%) | Imbalance |
Tumor Grade_pathology is highly imbalanced (80.9%) | Imbalance |
Necrosis_pathology is highly imbalanced (57.2%) | Imbalance |
DiagnosisSubtype_trathistory_paciente_specimens has 543 (19.9%) missing values | Missing |
Date RegimenStarted_trathistory_paciente_specimens has 402 (14.7%) missing values | Missing |
Best Response_trathistory_paciente_specimens has 2545 (93.1%) missing values | Missing |
DiagnosisSubtype_df_race_paciente_specimens has 543 (19.9%) missing values | Missing |
DiagnosisSubtype_df_pinfo_paciente_specimens has 543 (19.9%) missing values | Missing |
AdditionalMedicalHistory_df_pinfo_paciente_specimens has 311 (11.4%) missing values | Missing |
Molecular andIHC Data_df_pinfo_paciente_specimens has 335 (12.3%) missing values | Missing |
PatientNotes_df_pinfo_paciente_specimens has 331 (12.1%) missing values | Missing |
DiagnosisSubtype_specimen_specimens has 543 (19.9%) missing values | Missing |
ModelNotes_specimen_specimens has 513 (18.8%) missing values | Missing |
DiagnosisSubtype_samples has 543 (19.9%) missing values | Missing |
Passage_samples has 309 (11.3%) missing values | Missing |
Sample ID_gene has 627 (22.9%) missing values | Missing |
HugoSymbol_gene has 627 (22.9%) missing values | Missing |
Chr_gene has 627 (22.9%) missing values | Missing |
Chr End_gene has 627 (22.9%) missing values | Missing |
Chr Start_gene has 627 (22.9%) missing values | Missing |
HGVS ProteinChange_gene has 627 (22.9%) missing values | Missing |
HGVS cDNAChange_gene has 627 (22.9%) missing values | Missing |
Total Reads_gene has 627 (22.9%) missing values | Missing |
Variant AlleleFrequency_gene has 627 (22.9%) missing values | Missing |
VariantClass_gene has 627 (22.9%) missing values | Missing |
MutationEffect_gene has 627 (22.9%) missing values | Missing |
Oncogenicity_gene has 627 (22.9%) missing values | Missing |
Existing Variant_gene has 1599 (58.5%) missing values | Missing |
DiagnosisSubtype_pathology has 543 (19.9%) missing values | Missing |
Passage_pathology has 297 (10.9%) missing values | Missing |
Stromal_pathology has 218 (8.0%) zeros | Zeros |
Reproduction
| Analysis started | 2025-07-15 01:50:05.536798 |
|---|---|
| Analysis finished | 2025-07-15 01:50:33.234352 |
| Duration | 27.7 seconds |
| Software version | ydata-profiling vv4.16.1 |
| Download configuration | config.json |
Variables
Patient ID
Real number (ℝ)
High correlation 
| Distinct | 10 |
|---|---|
| Distinct (%) | 0.4% |
| Missing | 0 |
| Missing (%) | 0.0% |
| Infinite | 0 |
| Infinite (%) | 0.0% |
| Mean | 237938.16 |
| Minimum | 111316 |
|---|---|
| Maximum | 949853 |
| Zeros | 0 |
| Zeros (%) | 0.0% |
| Negative | 0 |
| Negative (%) | 0.0% |
| Memory size | 21.5 KiB |
Quantile statistics
| Minimum | 111316 |
|---|---|
| 5-th percentile | 111316 |
| Q1 | 111316 |
| median | 111316 |
| Q3 | 111316 |
| 95-th percentile | 814656 |
| Maximum | 949853 |
| Range | 838537 |
| Interquartile range (IQR) | 0 |
Descriptive statistics
| Standard deviation | 245399.81 |
|---|---|
| Coefficient of variation (CV) | 1.0313596 |
| Kurtosis | 1.2333676 |
| Mean | 237938.16 |
| Median Absolute Deviation (MAD) | 0 |
| Skewness | 1.6514702 |
| Sum | 6.50285 × 108 |
| Variance | 6.0221068 × 1010 |
| Monotonicity | Increasing |
| Value | Count | Frequency (%) |
| 111316 | 2106 | |
| 627122 | 200 | 7.3% |
| 429767 | 128 | 4.7% |
| 814656 | 108 | 4.0% |
| 636974 | 98 | 3.6% |
| 949853 | 84 | 3.1% |
| 738633 | 3 | 0.1% |
| 246632 | 2 | 0.1% |
| 358529 | 2 | 0.1% |
| 899375 | 2 | 0.1% |
| Value | Count | Frequency (%) |
| 111316 | 2106 | |
| 246632 | 2 | 0.1% |
| 358529 | 2 | 0.1% |
| 429767 | 128 | 4.7% |
| 627122 | 200 | 7.3% |
| 636974 | 98 | 3.6% |
| 738633 | 3 | 0.1% |
| 814656 | 108 | 4.0% |
| 899375 | 2 | 0.1% |
| 949853 | 84 | 3.1% |
| Value | Count | Frequency (%) |
| 949853 | 84 | 3.1% |
| 899375 | 2 | 0.1% |
| 814656 | 108 | 4.0% |
| 738633 | 3 | 0.1% |
| 636974 | 98 | 3.6% |
| 627122 | 200 | 7.3% |
| 429767 | 128 | 4.7% |
| 358529 | 2 | 0.1% |
| 246632 | 2 | 0.1% |
| 111316 | 2106 |
DiagnosisSubtype_trathistory_paciente_specimens
Categorical
High correlation  Imbalance  Missing 
| Distinct | 2 |
|---|---|
| Distinct (%) | 0.1% |
| Missing | 543 |
| Missing (%) | 19.9% |
| Memory size | 21.5 KiB |
| epithelioid type | |
|---|---|
| spindle type | 84 |
Length
| Max length | 16 |
|---|---|
| Median length | 16 |
| Mean length | 15.846575 |
| Min length | 12 |
Unique
| Unique | 0 ? |
|---|---|
| Unique (%) | 0.0% |
Sample
| 1st row | epithelioid type |
|---|---|
| 2nd row | epithelioid type |
| 3rd row | epithelioid type |
| 4th row | epithelioid type |
| 5th row | epithelioid type |
Common Values
| Value | Count | Frequency (%) |
| epithelioid type | 2106 | |
| spindle type | 84 | 3.1% |
| (Missing) | 543 | 19.9% |
Length
Common Values (Plot)
| Value | Count | Frequency (%) |
| type | 2190 | |
| epithelioid | 2106 | |
| spindle | 84 | 1.9% |
Most occurring characters
| Value | Count | Frequency (%) |
| e | 6486 | |
| i | 6402 | |
| p | 4380 | |
| t | 4296 | |
| l | 2190 | 6.3% |
| d | 2190 | 6.3% |
| y | 2190 | 6.3% |
| 2190 | 6.3% | |
| o | 2106 | 6.1% |
| h | 2106 | 6.1% |
| Other values (2) | 168 | 0.5% |
Most occurring categories
| Value | Count | Frequency (%) |
| (unknown) | 34704 |
Most frequent character per category
(unknown)
| Value | Count | Frequency (%) |
| e | 6486 | |
| i | 6402 | |
| p | 4380 | |
| t | 4296 | |
| l | 2190 | 6.3% |
| d | 2190 | 6.3% |
| y | 2190 | 6.3% |
| 2190 | 6.3% | |
| o | 2106 | 6.1% |
| h | 2106 | 6.1% |
| Other values (2) | 168 | 0.5% |
Most occurring scripts
| Value | Count | Frequency (%) |
| (unknown) | 34704 |
Most frequent character per script
(unknown)
| Value | Count | Frequency (%) |
| e | 6486 | |
| i | 6402 | |
| p | 4380 | |
| t | 4296 | |
| l | 2190 | 6.3% |
| d | 2190 | 6.3% |
| y | 2190 | 6.3% |
| 2190 | 6.3% | |
| o | 2106 | 6.1% |
| h | 2106 | 6.1% |
| Other values (2) | 168 | 0.5% |
Most occurring blocks
| Value | Count | Frequency (%) |
| (unknown) | 34704 |
Most frequent character per block
(unknown)
| Value | Count | Frequency (%) |
| e | 6486 | |
| i | 6402 | |
| p | 4380 | |
| t | 4296 | |
| l | 2190 | 6.3% |
| d | 2190 | 6.3% |
| y | 2190 | 6.3% |
| 2190 | 6.3% | |
| o | 2106 | 6.1% |
| h | 2106 | 6.1% |
| Other values (2) | 168 | 0.5% |
Timing_trathistory_paciente_specimens
Categorical
High correlation 
| Distinct | 2 |
|---|---|
| Distinct (%) | 0.1% |
| Missing | 0 |
| Missing (%) | 0.0% |
| Memory size | 21.5 KiB |
| Prior | |
|---|---|
| Current |
Length
| Max length | 7 |
|---|---|
| Median length | 5 |
| Mean length | 5.9864618 |
| Min length | 5 |
Unique
| Unique | 0 ? |
|---|---|
| Unique (%) | 0.0% |
Sample
| 1st row | Current |
|---|---|
| 2nd row | Current |
| 3rd row | Current |
| 4th row | Current |
| 5th row | Current |
Common Values
| Value | Count | Frequency (%) |
| Prior | 1385 | |
| Current | 1348 |
Length
Common Values (Plot)
| Value | Count | Frequency (%) |
| prior | 1385 | |
| current | 1348 |
Most occurring characters
| Value | Count | Frequency (%) |
| r | 5466 | |
| P | 1385 | 8.5% |
| i | 1385 | 8.5% |
| o | 1385 | 8.5% |
| C | 1348 | 8.2% |
| u | 1348 | 8.2% |
| e | 1348 | 8.2% |
| n | 1348 | 8.2% |
| t | 1348 | 8.2% |
Most occurring categories
| Value | Count | Frequency (%) |
| (unknown) | 16361 |
Most frequent character per category
(unknown)
| Value | Count | Frequency (%) |
| r | 5466 | |
| P | 1385 | 8.5% |
| i | 1385 | 8.5% |
| o | 1385 | 8.5% |
| C | 1348 | 8.2% |
| u | 1348 | 8.2% |
| e | 1348 | 8.2% |
| n | 1348 | 8.2% |
| t | 1348 | 8.2% |
Most occurring scripts
| Value | Count | Frequency (%) |
| (unknown) | 16361 |
Most frequent character per script
(unknown)
| Value | Count | Frequency (%) |
| r | 5466 | |
| P | 1385 | 8.5% |
| i | 1385 | 8.5% |
| o | 1385 | 8.5% |
| C | 1348 | 8.2% |
| u | 1348 | 8.2% |
| e | 1348 | 8.2% |
| n | 1348 | 8.2% |
| t | 1348 | 8.2% |
Most occurring blocks
| Value | Count | Frequency (%) |
| (unknown) | 16361 |
Most frequent character per block
(unknown)
| Value | Count | Frequency (%) |
| r | 5466 | |
| P | 1385 | 8.5% |
| i | 1385 | 8.5% |
| o | 1385 | 8.5% |
| C | 1348 | 8.2% |
| u | 1348 | 8.2% |
| e | 1348 | 8.2% |
| n | 1348 | 8.2% |
| t | 1348 | 8.2% |
Date RegimenStarted_trathistory_paciente_specimens
Date
Missing 
| Distinct | 11 |
|---|---|
| Distinct (%) | 0.5% |
| Missing | 402 |
| Missing (%) | 14.7% |
| Memory size | 21.5 KiB |
| Minimum | 2007-05-01 00:00:00 |
|---|---|
| Maximum | 2021-08-01 00:00:00 |
| Invalid dates | 0 |
| Invalid dates (%) | 0.0% |
StandardizedRegimen_trathistory_paciente_specimens
Categorical
High correlation 
| Distinct | 6 |
|---|---|
| Distinct (%) | 0.2% |
| Missing | 0 |
| Missing (%) | 0.0% |
| Memory size | 21.5 KiB |
| Imatinib Mesylate | |
|---|---|
| Ripretinib | |
| Treatment naive | |
| No Current Therapy | 116 |
| Sunitinib Malate | 1 |
Length
| Max length | 18 |
|---|---|
| Median length | 17 |
| Mean length | 14.132821 |
| Min length | 9 |
Unique
| Unique | 2 ? |
|---|---|
| Unique (%) | 0.1% |
Sample
| 1st row | Ripretinib |
|---|---|
| 2nd row | Ripretinib |
| 3rd row | Ripretinib |
| 4th row | Ripretinib |
| 5th row | Ripretinib |
Common Values
| Value | Count | Frequency (%) |
| Imatinib Mesylate | 1276 | |
| Ripretinib | 1053 | |
| Treatment naive | 286 | 10.5% |
| No Current Therapy | 116 | 4.2% |
| Sunitinib Malate | 1 | < 0.1% |
| Radiation | 1 | < 0.1% |
Length
Common Values (Plot)
| Value | Count | Frequency (%) |
| imatinib | 1276 | |
| mesylate | 1276 | |
| ripretinib | 1053 | |
| treatment | 286 | 6.3% |
| naive | 286 | 6.3% |
| no | 116 | 2.6% |
| current | 116 | 2.6% |
| therapy | 116 | 2.6% |
| sunitinib | 1 | < 0.1% |
| malate | 1 | < 0.1% |
Most occurring characters
| Value | Count | Frequency (%) |
| i | 6002 | |
| e | 4696 | |
| t | 4296 | |
| a | 3244 | 8.4% |
| n | 3020 | 7.8% |
| b | 2330 | 6.0% |
| 1795 | 4.6% | |
| r | 1687 | 4.4% |
| m | 1562 | 4.0% |
| y | 1392 | 3.6% |
| Other values (15) | 8601 |
Most occurring categories
| Value | Count | Frequency (%) |
| (unknown) | 38625 |
Most frequent character per category
(unknown)
| Value | Count | Frequency (%) |
| i | 6002 | |
| e | 4696 | |
| t | 4296 | |
| a | 3244 | 8.4% |
| n | 3020 | 7.8% |
| b | 2330 | 6.0% |
| 1795 | 4.6% | |
| r | 1687 | 4.4% |
| m | 1562 | 4.0% |
| y | 1392 | 3.6% |
| Other values (15) | 8601 |
Most occurring scripts
| Value | Count | Frequency (%) |
| (unknown) | 38625 |
Most frequent character per script
(unknown)
| Value | Count | Frequency (%) |
| i | 6002 | |
| e | 4696 | |
| t | 4296 | |
| a | 3244 | 8.4% |
| n | 3020 | 7.8% |
| b | 2330 | 6.0% |
| 1795 | 4.6% | |
| r | 1687 | 4.4% |
| m | 1562 | 4.0% |
| y | 1392 | 3.6% |
| Other values (15) | 8601 |
Most occurring blocks
| Value | Count | Frequency (%) |
| (unknown) | 38625 |
Most frequent character per block
(unknown)
| Value | Count | Frequency (%) |
| i | 6002 | |
| e | 4696 | |
| t | 4296 | |
| a | 3244 | 8.4% |
| n | 3020 | 7.8% |
| b | 2330 | 6.0% |
| 1795 | 4.6% | |
| r | 1687 | 4.4% |
| m | 1562 | 4.0% |
| y | 1392 | 3.6% |
| Other values (15) | 8601 |
Best Response_trathistory_paciente_specimens
Categorical
High correlation  Missing 
| Distinct | 5 |
|---|---|
| Distinct (%) | 2.7% |
| Missing | 2545 |
| Missing (%) | 93.1% |
| Memory size | 21.5 KiB |
| Stable Disease | |
|---|---|
| PR | |
| CR | |
| <Unknown> | 1 |
| Non-evaluable | 1 |
Length
| Max length | 14 |
|---|---|
| Median length | 14 |
| Mean length | 9.3085106 |
| Min length | 2 |
Unique
| Unique | 2 ? |
|---|---|
| Unique (%) | 1.1% |
Sample
| 1st row | PR |
|---|---|
| 2nd row | Stable Disease |
| 3rd row | Stable Disease |
| 4th row | Stable Disease |
| 5th row | Stable Disease |
Common Values
| Value | Count | Frequency (%) |
| Stable Disease | 113 | 4.1% |
| PR | 37 | 1.4% |
| CR | 36 | 1.3% |
| <Unknown> | 1 | < 0.1% |
| Non-evaluable | 1 | < 0.1% |
| (Missing) | 2545 |
Length
Common Values (Plot)
| Value | Count | Frequency (%) |
| stable | 113 | |
| disease | 113 | |
| pr | 37 | 12.3% |
| cr | 36 | 12.0% |
| unknown | 1 | 0.3% |
| non-evaluable | 1 | 0.3% |
Most occurring characters
| Value | Count | Frequency (%) |
| e | 341 | |
| a | 228 | |
| s | 226 | |
| l | 115 | 6.6% |
| b | 114 | 6.5% |
| S | 113 | 6.5% |
| 113 | 6.5% | |
| t | 113 | 6.5% |
| D | 113 | 6.5% |
| i | 113 | 6.5% |
| Other values (14) | 161 |
Most occurring categories
| Value | Count | Frequency (%) |
| (unknown) | 1750 |
Most frequent character per category
(unknown)
| Value | Count | Frequency (%) |
| e | 341 | |
| a | 228 | |
| s | 226 | |
| l | 115 | 6.6% |
| b | 114 | 6.5% |
| S | 113 | 6.5% |
| 113 | 6.5% | |
| t | 113 | 6.5% |
| D | 113 | 6.5% |
| i | 113 | 6.5% |
| Other values (14) | 161 |
Most occurring scripts
| Value | Count | Frequency (%) |
| (unknown) | 1750 |
Most frequent character per script
(unknown)
| Value | Count | Frequency (%) |
| e | 341 | |
| a | 228 | |
| s | 226 | |
| l | 115 | 6.6% |
| b | 114 | 6.5% |
| S | 113 | 6.5% |
| 113 | 6.5% | |
| t | 113 | 6.5% |
| D | 113 | 6.5% |
| i | 113 | 6.5% |
| Other values (14) | 161 |
Most occurring blocks
| Value | Count | Frequency (%) |
| (unknown) | 1750 |
Most frequent character per block
(unknown)
| Value | Count | Frequency (%) |
| e | 341 | |
| a | 228 | |
| s | 226 | |
| l | 115 | 6.6% |
| b | 114 | 6.5% |
| S | 113 | 6.5% |
| 113 | 6.5% | |
| t | 113 | 6.5% |
| D | 113 | 6.5% |
| i | 113 | 6.5% |
| Other values (14) | 161 |
DiagnosisSubtype_df_race_paciente_specimens
Categorical
High correlation  Imbalance  Missing 
| Distinct | 2 |
|---|---|
| Distinct (%) | 0.1% |
| Missing | 543 |
| Missing (%) | 19.9% |
| Memory size | 21.5 KiB |
| epithelioid type | |
|---|---|
| spindle type | 84 |
Length
| Max length | 16 |
|---|---|
| Median length | 16 |
| Mean length | 15.846575 |
| Min length | 12 |
Unique
| Unique | 0 ? |
|---|---|
| Unique (%) | 0.0% |
Sample
| 1st row | epithelioid type |
|---|---|
| 2nd row | epithelioid type |
| 3rd row | epithelioid type |
| 4th row | epithelioid type |
| 5th row | epithelioid type |
Common Values
| Value | Count | Frequency (%) |
| epithelioid type | 2106 | |
| spindle type | 84 | 3.1% |
| (Missing) | 543 | 19.9% |
Length
Common Values (Plot)
| Value | Count | Frequency (%) |
| type | 2190 | |
| epithelioid | 2106 | |
| spindle | 84 | 1.9% |
Most occurring characters
| Value | Count | Frequency (%) |
| e | 6486 | |
| i | 6402 | |
| p | 4380 | |
| t | 4296 | |
| l | 2190 | 6.3% |
| d | 2190 | 6.3% |
| y | 2190 | 6.3% |
| 2190 | 6.3% | |
| o | 2106 | 6.1% |
| h | 2106 | 6.1% |
| Other values (2) | 168 | 0.5% |
Most occurring categories
| Value | Count | Frequency (%) |
| (unknown) | 34704 |
Most frequent character per category
(unknown)
| Value | Count | Frequency (%) |
| e | 6486 | |
| i | 6402 | |
| p | 4380 | |
| t | 4296 | |
| l | 2190 | 6.3% |
| d | 2190 | 6.3% |
| y | 2190 | 6.3% |
| 2190 | 6.3% | |
| o | 2106 | 6.1% |
| h | 2106 | 6.1% |
| Other values (2) | 168 | 0.5% |
Most occurring scripts
| Value | Count | Frequency (%) |
| (unknown) | 34704 |
Most frequent character per script
(unknown)
| Value | Count | Frequency (%) |
| e | 6486 | |
| i | 6402 | |
| p | 4380 | |
| t | 4296 | |
| l | 2190 | 6.3% |
| d | 2190 | 6.3% |
| y | 2190 | 6.3% |
| 2190 | 6.3% | |
| o | 2106 | 6.1% |
| h | 2106 | 6.1% |
| Other values (2) | 168 | 0.5% |
Most occurring blocks
| Value | Count | Frequency (%) |
| (unknown) | 34704 |
Most frequent character per block
(unknown)
| Value | Count | Frequency (%) |
| e | 6486 | |
| i | 6402 | |
| p | 4380 | |
| t | 4296 | |
| l | 2190 | 6.3% |
| d | 2190 | 6.3% |
| y | 2190 | 6.3% |
| 2190 | 6.3% | |
| o | 2106 | 6.1% |
| h | 2106 | 6.1% |
| Other values (2) | 168 | 0.5% |
Self-ReportedRace_df_race_paciente_specimens
Categorical
High correlation  Imbalance 
| Distinct | 3 |
|---|---|
| Distinct (%) | 0.1% |
| Missing | 0 |
| Missing (%) | 0.0% |
| Memory size | 21.5 KiB |
| White | |
|---|---|
| Black or African American | 236 |
| Not Provided | 3 |
Length
| Max length | 25 |
|---|---|
| Median length | 5 |
| Mean length | 6.7347237 |
| Min length | 5 |
Unique
| Unique | 0 ? |
|---|---|
| Unique (%) | 0.0% |
Sample
| 1st row | White |
|---|---|
| 2nd row | White |
| 3rd row | White |
| 4th row | White |
| 5th row | White |
Common Values
| Value | Count | Frequency (%) |
| White | 2494 | |
| Black or African American | 236 | 8.6% |
| Not Provided | 3 | 0.1% |
Length
Common Values (Plot)
| Value | Count | Frequency (%) |
| white | 2494 | |
| black | 236 | 6.9% |
| or | 236 | 6.9% |
| african | 236 | 6.9% |
| american | 236 | 6.9% |
| not | 3 | 0.1% |
| provided | 3 | 0.1% |
Most occurring characters
| Value | Count | Frequency (%) |
| i | 2969 | |
| e | 2733 | |
| t | 2497 | |
| W | 2494 | |
| h | 2494 | |
| r | 711 | 3.9% |
| 711 | 3.9% | |
| c | 708 | 3.8% |
| a | 708 | 3.8% |
| n | 472 | 2.6% |
| Other values (11) | 1909 |
Most occurring categories
| Value | Count | Frequency (%) |
| (unknown) | 18406 |
Most frequent character per category
(unknown)
| Value | Count | Frequency (%) |
| i | 2969 | |
| e | 2733 | |
| t | 2497 | |
| W | 2494 | |
| h | 2494 | |
| r | 711 | 3.9% |
| 711 | 3.9% | |
| c | 708 | 3.8% |
| a | 708 | 3.8% |
| n | 472 | 2.6% |
| Other values (11) | 1909 |
Most occurring scripts
| Value | Count | Frequency (%) |
| (unknown) | 18406 |
Most frequent character per script
(unknown)
| Value | Count | Frequency (%) |
| i | 2969 | |
| e | 2733 | |
| t | 2497 | |
| W | 2494 | |
| h | 2494 | |
| r | 711 | 3.9% |
| 711 | 3.9% | |
| c | 708 | 3.8% |
| a | 708 | 3.8% |
| n | 472 | 2.6% |
| Other values (11) | 1909 |
Most occurring blocks
| Value | Count | Frequency (%) |
| (unknown) | 18406 |
Most frequent character per block
(unknown)
| Value | Count | Frequency (%) |
| i | 2969 | |
| e | 2733 | |
| t | 2497 | |
| W | 2494 | |
| h | 2494 | |
| r | 711 | 3.9% |
| 711 | 3.9% | |
| c | 708 | 3.8% |
| a | 708 | 3.8% |
| n | 472 | 2.6% |
| Other values (11) | 1909 |
Self-ReportedEthnicity_df_race_paciente_specimens
Categorical
High correlation  Imbalance 
| Distinct | 2 |
|---|---|
| Distinct (%) | 0.1% |
| Missing | 0 |
| Missing (%) | 0.0% |
| Memory size | 21.5 KiB |
| Not Hispanic or Latino | |
|---|---|
| Not Provided | 3 |
Length
| Max length | 22 |
|---|---|
| Median length | 22 |
| Mean length | 21.989023 |
| Min length | 12 |
Unique
| Unique | 0 ? |
|---|---|
| Unique (%) | 0.0% |
Sample
| 1st row | Not Hispanic or Latino |
|---|---|
| 2nd row | Not Hispanic or Latino |
| 3rd row | Not Hispanic or Latino |
| 4th row | Not Hispanic or Latino |
| 5th row | Not Hispanic or Latino |
Common Values
| Value | Count | Frequency (%) |
| Not Hispanic or Latino | 2730 | |
| Not Provided | 3 | 0.1% |
Length
Common Values (Plot)
| Value | Count | Frequency (%) |
| not | 2733 | |
| hispanic | 2730 | |
| or | 2730 | |
| latino | 2730 | |
| provided | 3 | < 0.1% |
Most occurring characters
| Value | Count | Frequency (%) |
| o | 8196 | |
| i | 8193 | |
| 8193 | ||
| t | 5463 | |
| a | 5460 | |
| n | 5460 | |
| N | 2733 | 4.5% |
| r | 2733 | 4.5% |
| H | 2730 | 4.5% |
| p | 2730 | 4.5% |
| Other values (7) | 8205 |
Most occurring categories
| Value | Count | Frequency (%) |
| (unknown) | 60096 |
Most frequent character per category
(unknown)
| Value | Count | Frequency (%) |
| o | 8196 | |
| i | 8193 | |
| 8193 | ||
| t | 5463 | |
| a | 5460 | |
| n | 5460 | |
| N | 2733 | 4.5% |
| r | 2733 | 4.5% |
| H | 2730 | 4.5% |
| p | 2730 | 4.5% |
| Other values (7) | 8205 |
Most occurring scripts
| Value | Count | Frequency (%) |
| (unknown) | 60096 |
Most frequent character per script
(unknown)
| Value | Count | Frequency (%) |
| o | 8196 | |
| i | 8193 | |
| 8193 | ||
| t | 5463 | |
| a | 5460 | |
| n | 5460 | |
| N | 2733 | 4.5% |
| r | 2733 | 4.5% |
| H | 2730 | 4.5% |
| p | 2730 | 4.5% |
| Other values (7) | 8205 |
Most occurring blocks
| Value | Count | Frequency (%) |
| (unknown) | 60096 |
Most frequent character per block
(unknown)
| Value | Count | Frequency (%) |
| o | 8196 | |
| i | 8193 | |
| 8193 | ||
| t | 5463 | |
| a | 5460 | |
| n | 5460 | |
| N | 2733 | 4.5% |
| r | 2733 | 4.5% |
| H | 2730 | 4.5% |
| p | 2730 | 4.5% |
| Other values (7) | 8205 |
%European(CEU)_df_race_paciente_specimens
Categorical
High correlation  Imbalance 
| Distinct | 4 |
|---|---|
| Distinct (%) | 0.1% |
| Missing | 0 |
| Missing (%) | 0.0% |
| Memory size | 21.5 KiB |
| 100 | |
|---|---|
| 18 | 128 |
| 0 | 112 |
| 73 | 3 |
Length
| Max length | 3 |
|---|---|
| Median length | 3 |
| Mean length | 2.8701061 |
| Min length | 1 |
Unique
| Unique | 0 ? |
|---|---|
| Unique (%) | 0.0% |
Sample
| 1st row | 100 |
|---|---|
| 2nd row | 100 |
| 3rd row | 100 |
| 4th row | 100 |
| 5th row | 100 |
Common Values
| Value | Count | Frequency (%) |
| 100 | 2490 | |
| 18 | 128 | 4.7% |
| 0 | 112 | 4.1% |
| 73 | 3 | 0.1% |
Length
Common Values (Plot)
| Value | Count | Frequency (%) |
| 100 | 2490 | |
| 18 | 128 | 4.7% |
| 0 | 112 | 4.1% |
| 73 | 3 | 0.1% |
Most occurring characters
| Value | Count | Frequency (%) |
| 0 | 5092 | |
| 1 | 2618 | |
| 8 | 128 | 1.6% |
| 7 | 3 | < 0.1% |
| 3 | 3 | < 0.1% |
Most occurring categories
| Value | Count | Frequency (%) |
| (unknown) | 7844 |
Most frequent character per category
(unknown)
| Value | Count | Frequency (%) |
| 0 | 5092 | |
| 1 | 2618 | |
| 8 | 128 | 1.6% |
| 7 | 3 | < 0.1% |
| 3 | 3 | < 0.1% |
Most occurring scripts
| Value | Count | Frequency (%) |
| (unknown) | 7844 |
Most frequent character per script
(unknown)
| Value | Count | Frequency (%) |
| 0 | 5092 | |
| 1 | 2618 | |
| 8 | 128 | 1.6% |
| 7 | 3 | < 0.1% |
| 3 | 3 | < 0.1% |
Most occurring blocks
| Value | Count | Frequency (%) |
| (unknown) | 7844 |
Most frequent character per block
(unknown)
| Value | Count | Frequency (%) |
| 0 | 5092 | |
| 1 | 2618 | |
| 8 | 128 | 1.6% |
| 7 | 3 | < 0.1% |
| 3 | 3 | < 0.1% |
%Native and LatinAmerican (NA)_df_race_paciente_specimens
Categorical
High correlation  Imbalance 
| Distinct | 2 |
|---|---|
| Distinct (%) | 0.1% |
| Missing | 0 |
| Missing (%) | 0.0% |
| Memory size | 21.5 KiB |
| 0 | |
|---|---|
| 27 | 3 |
Length
| Max length | 2 |
|---|---|
| Median length | 1 |
| Mean length | 1.0010977 |
| Min length | 1 |
Unique
| Unique | 0 ? |
|---|---|
| Unique (%) | 0.0% |
Sample
| 1st row | 0 |
|---|---|
| 2nd row | 0 |
| 3rd row | 0 |
| 4th row | 0 |
| 5th row | 0 |
Common Values
| Value | Count | Frequency (%) |
| 0 | 2730 | |
| 27 | 3 | 0.1% |
Length
Common Values (Plot)
| Value | Count | Frequency (%) |
| 0 | 2730 | |
| 27 | 3 | 0.1% |
Most occurring characters
| Value | Count | Frequency (%) |
| 0 | 2730 | |
| 2 | 3 | 0.1% |
| 7 | 3 | 0.1% |
Most occurring categories
| Value | Count | Frequency (%) |
| (unknown) | 2736 |
Most frequent character per category
(unknown)
| Value | Count | Frequency (%) |
| 0 | 2730 | |
| 2 | 3 | 0.1% |
| 7 | 3 | 0.1% |
Most occurring scripts
| Value | Count | Frequency (%) |
| (unknown) | 2736 |
Most frequent character per script
(unknown)
| Value | Count | Frequency (%) |
| 0 | 2730 | |
| 2 | 3 | 0.1% |
| 7 | 3 | 0.1% |
Most occurring blocks
| Value | Count | Frequency (%) |
| (unknown) | 2736 |
Most frequent character per block
(unknown)
| Value | Count | Frequency (%) |
| 0 | 2730 | |
| 2 | 3 | 0.1% |
| 7 | 3 | 0.1% |
%West African(YRI)_df_race_paciente_specimens
Categorical
High correlation  Imbalance 
| Distinct | 3 |
|---|---|
| Distinct (%) | 0.1% |
| Missing | 0 |
| Missing (%) | 0.0% |
| Memory size | 21.5 KiB |
| 0 | |
|---|---|
| 82 | 128 |
| 100 | 108 |
Length
| Max length | 3 |
|---|---|
| Median length | 1 |
| Mean length | 1.125869 |
| Min length | 1 |
Unique
| Unique | 0 ? |
|---|---|
| Unique (%) | 0.0% |
Sample
| 1st row | 0 |
|---|---|
| 2nd row | 0 |
| 3rd row | 0 |
| 4th row | 0 |
| 5th row | 0 |
Common Values
| Value | Count | Frequency (%) |
| 0 | 2497 | |
| 82 | 128 | 4.7% |
| 100 | 108 | 4.0% |
Length
Common Values (Plot)
| Value | Count | Frequency (%) |
| 0 | 2497 | |
| 82 | 128 | 4.7% |
| 100 | 108 | 4.0% |
Most occurring characters
| Value | Count | Frequency (%) |
| 0 | 2713 | |
| 8 | 128 | 4.2% |
| 2 | 128 | 4.2% |
| 1 | 108 | 3.5% |
Most occurring categories
| Value | Count | Frequency (%) |
| (unknown) | 3077 |
Most frequent character per category
(unknown)
| Value | Count | Frequency (%) |
| 0 | 2713 | |
| 8 | 128 | 4.2% |
| 2 | 128 | 4.2% |
| 1 | 108 | 3.5% |
Most occurring scripts
| Value | Count | Frequency (%) |
| (unknown) | 3077 |
Most frequent character per script
(unknown)
| Value | Count | Frequency (%) |
| 0 | 2713 | |
| 8 | 128 | 4.2% |
| 2 | 128 | 4.2% |
| 1 | 108 | 3.5% |
Most occurring blocks
| Value | Count | Frequency (%) |
| (unknown) | 3077 |
Most frequent character per block
(unknown)
| Value | Count | Frequency (%) |
| 0 | 2713 | |
| 8 | 128 | 4.2% |
| 2 | 128 | 4.2% |
| 1 | 108 | 3.5% |
InferredAncestry_df_race_paciente_specimens
Categorical
High correlation  Imbalance 
| Distinct | 4 |
|---|---|
| Distinct (%) | 0.1% |
| Missing | 0 |
| Missing (%) | 0.0% |
| Memory size | 21.5 KiB |
| European (CEU) | |
|---|---|
| West African (YRI) | 236 |
| Not Applicable | 4 |
| Mixed (All < 80%) | 3 |
Length
| Max length | 18 |
|---|---|
| Median length | 14 |
| Mean length | 14.348701 |
| Min length | 14 |
Unique
| Unique | 0 ? |
|---|---|
| Unique (%) | 0.0% |
Sample
| 1st row | European (CEU) |
|---|---|
| 2nd row | European (CEU) |
| 3rd row | European (CEU) |
| 4th row | European (CEU) |
| 5th row | European (CEU) |
Common Values
| Value | Count | Frequency (%) |
| European (CEU) | 2490 | |
| West African (YRI) | 236 | 8.6% |
| Not Applicable | 4 | 0.1% |
| Mixed (All < 80%) | 3 | 0.1% |
Length
Common Values (Plot)
| Value | Count | Frequency (%) |
| european | 2490 | |
| ceu | 2490 | |
| west | 236 | 4.1% |
| african | 236 | 4.1% |
| yri | 236 | 4.1% |
| not | 4 | 0.1% |
| applicable | 4 | 0.1% |
| mixed | 3 | 0.1% |
| all | 3 | 0.1% |
| 3 | 0.1% |
Most occurring characters
| Value | Count | Frequency (%) |
| E | 4980 | |
| 2975 | 7.6% | |
| e | 2733 | 7.0% |
| a | 2730 | 7.0% |
| ( | 2729 | 7.0% |
| ) | 2729 | 7.0% |
| r | 2726 | 7.0% |
| n | 2726 | 7.0% |
| p | 2498 | 6.4% |
| o | 2494 | 6.4% |
| Other values (23) | 9895 |
Most occurring categories
| Value | Count | Frequency (%) |
| (unknown) | 39215 |
Most frequent character per category
(unknown)
| Value | Count | Frequency (%) |
| E | 4980 | |
| 2975 | 7.6% | |
| e | 2733 | 7.0% |
| a | 2730 | 7.0% |
| ( | 2729 | 7.0% |
| ) | 2729 | 7.0% |
| r | 2726 | 7.0% |
| n | 2726 | 7.0% |
| p | 2498 | 6.4% |
| o | 2494 | 6.4% |
| Other values (23) | 9895 |
Most occurring scripts
| Value | Count | Frequency (%) |
| (unknown) | 39215 |
Most frequent character per script
(unknown)
| Value | Count | Frequency (%) |
| E | 4980 | |
| 2975 | 7.6% | |
| e | 2733 | 7.0% |
| a | 2730 | 7.0% |
| ( | 2729 | 7.0% |
| ) | 2729 | 7.0% |
| r | 2726 | 7.0% |
| n | 2726 | 7.0% |
| p | 2498 | 6.4% |
| o | 2494 | 6.4% |
| Other values (23) | 9895 |
Most occurring blocks
| Value | Count | Frequency (%) |
| (unknown) | 39215 |
Most frequent character per block
(unknown)
| Value | Count | Frequency (%) |
| E | 4980 | |
| 2975 | 7.6% | |
| e | 2733 | 7.0% |
| a | 2730 | 7.0% |
| ( | 2729 | 7.0% |
| ) | 2729 | 7.0% |
| r | 2726 | 7.0% |
| n | 2726 | 7.0% |
| p | 2498 | 6.4% |
| o | 2494 | 6.4% |
| Other values (23) | 9895 |
BiologicalSex_df_pinfo_paciente_specimens
Categorical
High correlation  Imbalance 
| Distinct | 2 |
|---|---|
| Distinct (%) | 0.1% |
| Missing | 0 |
| Missing (%) | 0.0% |
| Memory size | 21.5 KiB |
| Male | |
|---|---|
| Female | 241 |
Length
| Max length | 6 |
|---|---|
| Median length | 4 |
| Mean length | 4.176363 |
| Min length | 4 |
Unique
| Unique | 0 ? |
|---|---|
| Unique (%) | 0.0% |
Sample
| 1st row | Male |
|---|---|
| 2nd row | Male |
| 3rd row | Male |
| 4th row | Male |
| 5th row | Male |
Common Values
| Value | Count | Frequency (%) |
| Male | 2492 | |
| Female | 241 | 8.8% |
Length
Common Values (Plot)
| Value | Count | Frequency (%) |
| male | 2492 | |
| female | 241 | 8.8% |
Most occurring characters
| Value | Count | Frequency (%) |
| e | 2974 | |
| a | 2733 | |
| l | 2733 | |
| M | 2492 | |
| F | 241 | 2.1% |
| m | 241 | 2.1% |
Most occurring categories
| Value | Count | Frequency (%) |
| (unknown) | 11414 |
Most frequent character per category
(unknown)
| Value | Count | Frequency (%) |
| e | 2974 | |
| a | 2733 | |
| l | 2733 | |
| M | 2492 | |
| F | 241 | 2.1% |
| m | 241 | 2.1% |
Most occurring scripts
| Value | Count | Frequency (%) |
| (unknown) | 11414 |
Most frequent character per script
(unknown)
| Value | Count | Frequency (%) |
| e | 2974 | |
| a | 2733 | |
| l | 2733 | |
| M | 2492 | |
| F | 241 | 2.1% |
| m | 241 | 2.1% |
Most occurring blocks
| Value | Count | Frequency (%) |
| (unknown) | 11414 |
Most frequent character per block
(unknown)
| Value | Count | Frequency (%) |
| e | 2974 | |
| a | 2733 | |
| l | 2733 | |
| M | 2492 | |
| F | 241 | 2.1% |
| m | 241 | 2.1% |
DiagnosisSubtype_df_pinfo_paciente_specimens
Categorical
High correlation  Imbalance  Missing 
| Distinct | 2 |
|---|---|
| Distinct (%) | 0.1% |
| Missing | 543 |
| Missing (%) | 19.9% |
| Memory size | 21.5 KiB |
| epithelioid type | |
|---|---|
| spindle type | 84 |
Length
| Max length | 16 |
|---|---|
| Median length | 16 |
| Mean length | 15.846575 |
| Min length | 12 |
Unique
| Unique | 0 ? |
|---|---|
| Unique (%) | 0.0% |
Sample
| 1st row | epithelioid type |
|---|---|
| 2nd row | epithelioid type |
| 3rd row | epithelioid type |
| 4th row | epithelioid type |
| 5th row | epithelioid type |
Common Values
| Value | Count | Frequency (%) |
| epithelioid type | 2106 | |
| spindle type | 84 | 3.1% |
| (Missing) | 543 | 19.9% |
Length
Common Values (Plot)
| Value | Count | Frequency (%) |
| type | 2190 | |
| epithelioid | 2106 | |
| spindle | 84 | 1.9% |
Most occurring characters
| Value | Count | Frequency (%) |
| e | 6486 | |
| i | 6402 | |
| p | 4380 | |
| t | 4296 | |
| l | 2190 | 6.3% |
| d | 2190 | 6.3% |
| y | 2190 | 6.3% |
| 2190 | 6.3% | |
| o | 2106 | 6.1% |
| h | 2106 | 6.1% |
| Other values (2) | 168 | 0.5% |
Most occurring categories
| Value | Count | Frequency (%) |
| (unknown) | 34704 |
Most frequent character per category
(unknown)
| Value | Count | Frequency (%) |
| e | 6486 | |
| i | 6402 | |
| p | 4380 | |
| t | 4296 | |
| l | 2190 | 6.3% |
| d | 2190 | 6.3% |
| y | 2190 | 6.3% |
| 2190 | 6.3% | |
| o | 2106 | 6.1% |
| h | 2106 | 6.1% |
| Other values (2) | 168 | 0.5% |
Most occurring scripts
| Value | Count | Frequency (%) |
| (unknown) | 34704 |
Most frequent character per script
(unknown)
| Value | Count | Frequency (%) |
| e | 6486 | |
| i | 6402 | |
| p | 4380 | |
| t | 4296 | |
| l | 2190 | 6.3% |
| d | 2190 | 6.3% |
| y | 2190 | 6.3% |
| 2190 | 6.3% | |
| o | 2106 | 6.1% |
| h | 2106 | 6.1% |
| Other values (2) | 168 | 0.5% |
Most occurring blocks
| Value | Count | Frequency (%) |
| (unknown) | 34704 |
Most frequent character per block
(unknown)
| Value | Count | Frequency (%) |
| e | 6486 | |
| i | 6402 | |
| p | 4380 | |
| t | 4296 | |
| l | 2190 | 6.3% |
| d | 2190 | 6.3% |
| y | 2190 | 6.3% |
| 2190 | 6.3% | |
| o | 2106 | 6.1% |
| h | 2106 | 6.1% |
| Other values (2) | 168 | 0.5% |
Age atDiagnosis_df_pinfo_paciente_specimens
Real number (ℝ)
High correlation 
| Distinct | 9 |
|---|---|
| Distinct (%) | 0.3% |
| Missing | 0 |
| Missing (%) | 0.0% |
| Infinite | 0 |
| Infinite (%) | 0.0% |
| Mean | 56.003293 |
| Minimum | 31 |
|---|---|
| Maximum | 80 |
| Zeros | 0 |
| Zeros (%) | 0.0% |
| Negative | 0 |
| Negative (%) | 0.0% |
| Memory size | 21.5 KiB |
Quantile statistics
| Minimum | 31 |
|---|---|
| 5-th percentile | 39 |
| Q1 | 58 |
| median | 58 |
| Q3 | 58 |
| 95-th percentile | 58 |
| Maximum | 80 |
| Range | 49 |
| Interquartile range (IQR) | 0 |
Descriptive statistics
| Standard deviation | 6.2147681 |
|---|---|
| Coefficient of variation (CV) | 0.11097148 |
| Kurtosis | 3.6330809 |
| Mean | 56.003293 |
| Median Absolute Deviation (MAD) | 0 |
| Skewness | -2.0186807 |
| Sum | 153057 |
| Variance | 38.623342 |
| Monotonicity | Not monotonic |
| Value | Count | Frequency (%) |
| 58 | 2106 | |
| 39 | 284 | 10.4% |
| 53 | 128 | 4.7% |
| 57 | 108 | 4.0% |
| 66 | 98 | 3.6% |
| 31 | 3 | 0.1% |
| 51 | 2 | 0.1% |
| 35 | 2 | 0.1% |
| 80 | 2 | 0.1% |
| Value | Count | Frequency (%) |
| 31 | 3 | 0.1% |
| 35 | 2 | 0.1% |
| 39 | 284 | 10.4% |
| 51 | 2 | 0.1% |
| 53 | 128 | 4.7% |
| 57 | 108 | 4.0% |
| 58 | 2106 | |
| 66 | 98 | 3.6% |
| 80 | 2 | 0.1% |
| Value | Count | Frequency (%) |
| 80 | 2 | 0.1% |
| 66 | 98 | 3.6% |
| 58 | 2106 | |
| 57 | 108 | 4.0% |
| 53 | 128 | 4.7% |
| 51 | 2 | 0.1% |
| 39 | 284 | 10.4% |
| 35 | 2 | 0.1% |
| 31 | 3 | 0.1% |
%European(CEU)_df_pinfo_paciente_specimens
Categorical
High correlation  Imbalance 
| Distinct | 4 |
|---|---|
| Distinct (%) | 0.1% |
| Missing | 0 |
| Missing (%) | 0.0% |
| Memory size | 21.5 KiB |
| 100 | |
|---|---|
| 18 | 128 |
| 0 | 112 |
| 73 | 3 |
Length
| Max length | 3 |
|---|---|
| Median length | 3 |
| Mean length | 2.8701061 |
| Min length | 1 |
Unique
| Unique | 0 ? |
|---|---|
| Unique (%) | 0.0% |
Sample
| 1st row | 100 |
|---|---|
| 2nd row | 100 |
| 3rd row | 100 |
| 4th row | 100 |
| 5th row | 100 |
Common Values
| Value | Count | Frequency (%) |
| 100 | 2490 | |
| 18 | 128 | 4.7% |
| 0 | 112 | 4.1% |
| 73 | 3 | 0.1% |
Length
Common Values (Plot)
| Value | Count | Frequency (%) |
| 100 | 2490 | |
| 18 | 128 | 4.7% |
| 0 | 112 | 4.1% |
| 73 | 3 | 0.1% |
Most occurring characters
| Value | Count | Frequency (%) |
| 0 | 5092 | |
| 1 | 2618 | |
| 8 | 128 | 1.6% |
| 7 | 3 | < 0.1% |
| 3 | 3 | < 0.1% |
Most occurring categories
| Value | Count | Frequency (%) |
| (unknown) | 7844 |
Most frequent character per category
(unknown)
| Value | Count | Frequency (%) |
| 0 | 5092 | |
| 1 | 2618 | |
| 8 | 128 | 1.6% |
| 7 | 3 | < 0.1% |
| 3 | 3 | < 0.1% |
Most occurring scripts
| Value | Count | Frequency (%) |
| (unknown) | 7844 |
Most frequent character per script
(unknown)
| Value | Count | Frequency (%) |
| 0 | 5092 | |
| 1 | 2618 | |
| 8 | 128 | 1.6% |
| 7 | 3 | < 0.1% |
| 3 | 3 | < 0.1% |
Most occurring blocks
| Value | Count | Frequency (%) |
| (unknown) | 7844 |
Most frequent character per block
(unknown)
| Value | Count | Frequency (%) |
| 0 | 5092 | |
| 1 | 2618 | |
| 8 | 128 | 1.6% |
| 7 | 3 | < 0.1% |
| 3 | 3 | < 0.1% |
%Native and LatinAmerican (NA)_df_pinfo_paciente_specimens
Categorical
High correlation  Imbalance 
| Distinct | 2 |
|---|---|
| Distinct (%) | 0.1% |
| Missing | 0 |
| Missing (%) | 0.0% |
| Memory size | 21.5 KiB |
| 0 | |
|---|---|
| 27 | 3 |
Length
| Max length | 2 |
|---|---|
| Median length | 1 |
| Mean length | 1.0010977 |
| Min length | 1 |
Unique
| Unique | 0 ? |
|---|---|
| Unique (%) | 0.0% |
Sample
| 1st row | 0 |
|---|---|
| 2nd row | 0 |
| 3rd row | 0 |
| 4th row | 0 |
| 5th row | 0 |
Common Values
| Value | Count | Frequency (%) |
| 0 | 2730 | |
| 27 | 3 | 0.1% |
Length
Common Values (Plot)
| Value | Count | Frequency (%) |
| 0 | 2730 | |
| 27 | 3 | 0.1% |
Most occurring characters
| Value | Count | Frequency (%) |
| 0 | 2730 | |
| 2 | 3 | 0.1% |
| 7 | 3 | 0.1% |
Most occurring categories
| Value | Count | Frequency (%) |
| (unknown) | 2736 |
Most frequent character per category
(unknown)
| Value | Count | Frequency (%) |
| 0 | 2730 | |
| 2 | 3 | 0.1% |
| 7 | 3 | 0.1% |
Most occurring scripts
| Value | Count | Frequency (%) |
| (unknown) | 2736 |
Most frequent character per script
(unknown)
| Value | Count | Frequency (%) |
| 0 | 2730 | |
| 2 | 3 | 0.1% |
| 7 | 3 | 0.1% |
Most occurring blocks
| Value | Count | Frequency (%) |
| (unknown) | 2736 |
Most frequent character per block
(unknown)
| Value | Count | Frequency (%) |
| 0 | 2730 | |
| 2 | 3 | 0.1% |
| 7 | 3 | 0.1% |
%West African(YRI)_df_pinfo_paciente_specimens
Categorical
High correlation  Imbalance 
| Distinct | 3 |
|---|---|
| Distinct (%) | 0.1% |
| Missing | 0 |
| Missing (%) | 0.0% |
| Memory size | 21.5 KiB |
| 0 | |
|---|---|
| 82 | 128 |
| 100 | 108 |
Length
| Max length | 3 |
|---|---|
| Median length | 1 |
| Mean length | 1.125869 |
| Min length | 1 |
Unique
| Unique | 0 ? |
|---|---|
| Unique (%) | 0.0% |
Sample
| 1st row | 0 |
|---|---|
| 2nd row | 0 |
| 3rd row | 0 |
| 4th row | 0 |
| 5th row | 0 |
Common Values
| Value | Count | Frequency (%) |
| 0 | 2497 | |
| 82 | 128 | 4.7% |
| 100 | 108 | 4.0% |
Length
Common Values (Plot)
| Value | Count | Frequency (%) |
| 0 | 2497 | |
| 82 | 128 | 4.7% |
| 100 | 108 | 4.0% |
Most occurring characters
| Value | Count | Frequency (%) |
| 0 | 2713 | |
| 8 | 128 | 4.2% |
| 2 | 128 | 4.2% |
| 1 | 108 | 3.5% |
Most occurring categories
| Value | Count | Frequency (%) |
| (unknown) | 3077 |
Most frequent character per category
(unknown)
| Value | Count | Frequency (%) |
| 0 | 2713 | |
| 8 | 128 | 4.2% |
| 2 | 128 | 4.2% |
| 1 | 108 | 3.5% |
Most occurring scripts
| Value | Count | Frequency (%) |
| (unknown) | 3077 |
Most frequent character per script
(unknown)
| Value | Count | Frequency (%) |
| 0 | 2713 | |
| 8 | 128 | 4.2% |
| 2 | 128 | 4.2% |
| 1 | 108 | 3.5% |
Most occurring blocks
| Value | Count | Frequency (%) |
| (unknown) | 3077 |
Most frequent character per block
(unknown)
| Value | Count | Frequency (%) |
| 0 | 2713 | |
| 8 | 128 | 4.2% |
| 2 | 128 | 4.2% |
| 1 | 108 | 3.5% |
AdditionalMedicalHistory_df_pinfo_paciente_specimens
Categorical
High correlation  Imbalance  Missing 
| Distinct | 7 |
|---|---|
| Distinct (%) | 0.3% |
| Missing | 311 |
| Missing (%) | 11.4% |
| Memory size | 21.5 KiB |
| Final Pathology: Dx confirmed; mitotic rate is 47/30 HPF; treatment effect present w/central necrosis. | |
|---|---|
| Site of resection included spleen, kidney, distal pancreatectomy and retroperitoneal tumor | 128 |
| History of low-grade papillary urothelial carcinoma <1year prior | 98 |
| Final Pathology: Stomach - Dx confirmed, predominantly spindle-cell type. Mitotic count: 80 per 5mm2. Liver: Metastatic gastrointestinal stromal sarcoma. | 84 |
| Concurrent malignancy - SDHB gene mutation associated paraganglioma | 2 |
| Other values (2) | 4 |
Length
| Max length | 155 |
|---|---|
| Median length | 102 |
| Mean length | 101.5673 |
| Min length | 33 |
Unique
| Unique | 0 ? |
|---|---|
| Unique (%) | 0.0% |
Sample
| 1st row | Final Pathology: Dx confirmed; mitotic rate is 47/30 HPF; treatment effect present w/central necrosis. |
|---|---|
| 2nd row | Final Pathology: Dx confirmed; mitotic rate is 47/30 HPF; treatment effect present w/central necrosis. |
| 3rd row | Final Pathology: Dx confirmed; mitotic rate is 47/30 HPF; treatment effect present w/central necrosis. |
| 4th row | Final Pathology: Dx confirmed; mitotic rate is 47/30 HPF; treatment effect present w/central necrosis. |
| 5th row | Final Pathology: Dx confirmed; mitotic rate is 47/30 HPF; treatment effect present w/central necrosis. |
Common Values
| Value | Count | Frequency (%) |
| Final Pathology: Dx confirmed; mitotic rate is 47/30 HPF; treatment effect present w/central necrosis. | 2106 | |
| Site of resection included spleen, kidney, distal pancreatectomy and retroperitoneal tumor | 128 | 4.7% |
| History of low-grade papillary urothelial carcinoma <1year prior | 98 | 3.6% |
| Final Pathology: Stomach - Dx confirmed, predominantly spindle-cell type. Mitotic count: 80 per 5mm2. Liver: Metastatic gastrointestinal stromal sarcoma. | 84 | 3.1% |
| Concurrent malignancy - SDHB gene mutation associated paraganglioma | 2 | 0.1% |
| Final Pathology: Dx confirmed with treatment effect present; 50% viable tumor remains | 2 | 0.1% |
| Prior Malignancy: Prostate Cancer | 2 | 0.1% |
| (Missing) | 311 | 11.4% |
Length
Common Values (Plot)
| Value | Count | Frequency (%) |
| final | 2192 | 6.6% |
| pathology | 2192 | 6.6% |
| dx | 2192 | 6.6% |
| confirmed | 2192 | 6.6% |
| mitotic | 2190 | 6.6% |
| treatment | 2108 | 6.3% |
| effect | 2108 | 6.3% |
| present | 2108 | 6.3% |
| is | 2106 | 6.3% |
| hpf | 2106 | 6.3% |
| Other values (49) | 11826 |
Most occurring characters
| Value | Count | Frequency (%) |
| 31068 | ||
| e | 23676 | 9.6% |
| t | 23484 | 9.5% |
| r | 14800 | 6.0% |
| i | 14756 | 6.0% |
| n | 14332 | 5.8% |
| a | 12816 | 5.2% |
| o | 12746 | 5.2% |
| c | 11840 | 4.8% |
| s | 9420 | 3.8% |
| Other values (39) | 77058 |
Most occurring categories
| Value | Count | Frequency (%) |
| (unknown) | 245996 |
Most frequent character per category
(unknown)
| Value | Count | Frequency (%) |
| 31068 | ||
| e | 23676 | 9.6% |
| t | 23484 | 9.5% |
| r | 14800 | 6.0% |
| i | 14756 | 6.0% |
| n | 14332 | 5.8% |
| a | 12816 | 5.2% |
| o | 12746 | 5.2% |
| c | 11840 | 4.8% |
| s | 9420 | 3.8% |
| Other values (39) | 77058 |
Most occurring scripts
| Value | Count | Frequency (%) |
| (unknown) | 245996 |
Most frequent character per script
(unknown)
| Value | Count | Frequency (%) |
| 31068 | ||
| e | 23676 | 9.6% |
| t | 23484 | 9.5% |
| r | 14800 | 6.0% |
| i | 14756 | 6.0% |
| n | 14332 | 5.8% |
| a | 12816 | 5.2% |
| o | 12746 | 5.2% |
| c | 11840 | 4.8% |
| s | 9420 | 3.8% |
| Other values (39) | 77058 |
Most occurring blocks
| Value | Count | Frequency (%) |
| (unknown) | 245996 |
Most frequent character per block
(unknown)
| Value | Count | Frequency (%) |
| 31068 | ||
| e | 23676 | 9.6% |
| t | 23484 | 9.5% |
| r | 14800 | 6.0% |
| i | 14756 | 6.0% |
| n | 14332 | 5.8% |
| a | 12816 | 5.2% |
| o | 12746 | 5.2% |
| c | 11840 | 4.8% |
| s | 9420 | 3.8% |
| Other values (39) | 77058 |
| Distinct | 10 |
|---|---|
| Distinct (%) | 0.4% |
| Missing | 0 |
| Missing (%) | 0.0% |
| Memory size | 21.5 KiB |
| Minimum | 2007-01-01 00:00:00 |
|---|---|
| Maximum | 2020-07-01 00:00:00 |
| Invalid dates | 0 |
| Invalid dates (%) | 0.0% |
Ethnicity_df_pinfo_paciente_specimens
Categorical
High correlation  Imbalance 
| Distinct | 2 |
|---|---|
| Distinct (%) | 0.1% |
| Missing | 0 |
| Missing (%) | 0.0% |
| Memory size | 21.5 KiB |
| Not Hispanic or Latino | |
|---|---|
| Not Provided | 3 |
Length
| Max length | 22 |
|---|---|
| Median length | 22 |
| Mean length | 21.989023 |
| Min length | 12 |
Unique
| Unique | 0 ? |
|---|---|
| Unique (%) | 0.0% |
Sample
| 1st row | Not Hispanic or Latino |
|---|---|
| 2nd row | Not Hispanic or Latino |
| 3rd row | Not Hispanic or Latino |
| 4th row | Not Hispanic or Latino |
| 5th row | Not Hispanic or Latino |
Common Values
| Value | Count | Frequency (%) |
| Not Hispanic or Latino | 2730 | |
| Not Provided | 3 | 0.1% |
Length
Common Values (Plot)
| Value | Count | Frequency (%) |
| not | 2733 | |
| hispanic | 2730 | |
| or | 2730 | |
| latino | 2730 | |
| provided | 3 | < 0.1% |
Most occurring characters
| Value | Count | Frequency (%) |
| o | 8196 | |
| i | 8193 | |
| 8193 | ||
| t | 5463 | |
| a | 5460 | |
| n | 5460 | |
| N | 2733 | 4.5% |
| r | 2733 | 4.5% |
| H | 2730 | 4.5% |
| p | 2730 | 4.5% |
| Other values (7) | 8205 |
Most occurring categories
| Value | Count | Frequency (%) |
| (unknown) | 60096 |
Most frequent character per category
(unknown)
| Value | Count | Frequency (%) |
| o | 8196 | |
| i | 8193 | |
| 8193 | ||
| t | 5463 | |
| a | 5460 | |
| n | 5460 | |
| N | 2733 | 4.5% |
| r | 2733 | 4.5% |
| H | 2730 | 4.5% |
| p | 2730 | 4.5% |
| Other values (7) | 8205 |
Most occurring scripts
| Value | Count | Frequency (%) |
| (unknown) | 60096 |
Most frequent character per script
(unknown)
| Value | Count | Frequency (%) |
| o | 8196 | |
| i | 8193 | |
| 8193 | ||
| t | 5463 | |
| a | 5460 | |
| n | 5460 | |
| N | 2733 | 4.5% |
| r | 2733 | 4.5% |
| H | 2730 | 4.5% |
| p | 2730 | 4.5% |
| Other values (7) | 8205 |
Most occurring blocks
| Value | Count | Frequency (%) |
| (unknown) | 60096 |
Most frequent character per block
(unknown)
| Value | Count | Frequency (%) |
| o | 8196 | |
| i | 8193 | |
| 8193 | ||
| t | 5463 | |
| a | 5460 | |
| n | 5460 | |
| N | 2733 | 4.5% |
| r | 2733 | 4.5% |
| H | 2730 | 4.5% |
| p | 2730 | 4.5% |
| Other values (7) | 8205 |
Grade StageInformation_df_pinfo_paciente_specimens
Categorical
High correlation  Imbalance 
| Distinct | 5 |
|---|---|
| Distinct (%) | 0.2% |
| Missing | 0 |
| Missing (%) | 0.0% |
| Memory size | 21.5 KiB |
| Grade, TNM (Clinical) | |
|---|---|
| None Provided | |
| Grade, TNM | 206 |
| Grade, TNM (Pathological) | 2 |
| TNM (Pathological) | 2 |
Length
| Max length | 25 |
|---|---|
| Median length | 21 |
| Mean length | 18.95097 |
| Min length | 10 |
Unique
| Unique | 0 ? |
|---|---|
| Unique (%) | 0.0% |
Sample
| 1st row | Grade, TNM (Clinical) |
|---|---|
| 2nd row | Grade, TNM (Clinical) |
| 3rd row | Grade, TNM (Clinical) |
| 4th row | Grade, TNM (Clinical) |
| 5th row | Grade, TNM (Clinical) |
Common Values
| Value | Count | Frequency (%) |
| Grade, TNM (Clinical) | 2106 | |
| None Provided | 417 | 15.3% |
| Grade, TNM | 206 | 7.5% |
| Grade, TNM (Pathological) | 2 | 0.1% |
| TNM (Pathological) | 2 | 0.1% |
Length
Common Values (Plot)
| Value | Count | Frequency (%) |
| tnm | 2316 | |
| grade | 2314 | |
| clinical | 2106 | |
| none | 417 | 5.5% |
| provided | 417 | 5.5% |
| pathological | 4 | 0.1% |
Most occurring characters
| Value | Count | Frequency (%) |
| 4841 | 9.3% | |
| i | 4633 | 8.9% |
| a | 4428 | 8.5% |
| l | 4220 | 8.1% |
| d | 3148 | 6.1% |
| e | 3148 | 6.1% |
| N | 2733 | 5.3% |
| r | 2731 | 5.3% |
| n | 2523 | 4.9% |
| T | 2316 | 4.5% |
| Other values (13) | 17072 |
Most occurring categories
| Value | Count | Frequency (%) |
| (unknown) | 51793 |
Most frequent character per category
(unknown)
| Value | Count | Frequency (%) |
| 4841 | 9.3% | |
| i | 4633 | 8.9% |
| a | 4428 | 8.5% |
| l | 4220 | 8.1% |
| d | 3148 | 6.1% |
| e | 3148 | 6.1% |
| N | 2733 | 5.3% |
| r | 2731 | 5.3% |
| n | 2523 | 4.9% |
| T | 2316 | 4.5% |
| Other values (13) | 17072 |
Most occurring scripts
| Value | Count | Frequency (%) |
| (unknown) | 51793 |
Most frequent character per script
(unknown)
| Value | Count | Frequency (%) |
| 4841 | 9.3% | |
| i | 4633 | 8.9% |
| a | 4428 | 8.5% |
| l | 4220 | 8.1% |
| d | 3148 | 6.1% |
| e | 3148 | 6.1% |
| N | 2733 | 5.3% |
| r | 2731 | 5.3% |
| n | 2523 | 4.9% |
| T | 2316 | 4.5% |
| Other values (13) | 17072 |
Most occurring blocks
| Value | Count | Frequency (%) |
| (unknown) | 51793 |
Most frequent character per block
(unknown)
| Value | Count | Frequency (%) |
| 4841 | 9.3% | |
| i | 4633 | 8.9% |
| a | 4428 | 8.5% |
| l | 4220 | 8.1% |
| d | 3148 | 6.1% |
| e | 3148 | 6.1% |
| N | 2733 | 5.3% |
| r | 2731 | 5.3% |
| n | 2523 | 4.9% |
| T | 2316 | 4.5% |
| Other values (13) | 17072 |
Has KnownMetastaticDisease_df_pinfo_paciente_specimens
Categorical
High correlation 
| Distinct | 2 |
|---|---|
| Distinct (%) | 0.1% |
| Missing | 0 |
| Missing (%) | 0.0% |
| Memory size | 21.5 KiB |
| Yes | |
|---|---|
| Not Reported |
Length
| Max length | 12 |
|---|---|
| Median length | 3 |
| Mean length | 4.0439078 |
| Min length | 3 |
Unique
| Unique | 0 ? |
|---|---|
| Unique (%) | 0.0% |
Sample
| 1st row | Yes |
|---|---|
| 2nd row | Yes |
| 3rd row | Yes |
| 4th row | Yes |
| 5th row | Yes |
Common Values
| Value | Count | Frequency (%) |
| Yes | 2416 | |
| Not Reported | 317 | 11.6% |
Length
Common Values (Plot)
| Value | Count | Frequency (%) |
| yes | 2416 | |
| not | 317 | 10.4% |
| reported | 317 | 10.4% |
Most occurring characters
| Value | Count | Frequency (%) |
| e | 3050 | |
| Y | 2416 | |
| s | 2416 | |
| o | 634 | 5.7% |
| t | 634 | 5.7% |
| N | 317 | 2.9% |
| 317 | 2.9% | |
| R | 317 | 2.9% |
| p | 317 | 2.9% |
| r | 317 | 2.9% |
Most occurring categories
| Value | Count | Frequency (%) |
| (unknown) | 11052 |
Most frequent character per category
(unknown)
| Value | Count | Frequency (%) |
| e | 3050 | |
| Y | 2416 | |
| s | 2416 | |
| o | 634 | 5.7% |
| t | 634 | 5.7% |
| N | 317 | 2.9% |
| 317 | 2.9% | |
| R | 317 | 2.9% |
| p | 317 | 2.9% |
| r | 317 | 2.9% |
Most occurring scripts
| Value | Count | Frequency (%) |
| (unknown) | 11052 |
Most frequent character per script
(unknown)
| Value | Count | Frequency (%) |
| e | 3050 | |
| Y | 2416 | |
| s | 2416 | |
| o | 634 | 5.7% |
| t | 634 | 5.7% |
| N | 317 | 2.9% |
| 317 | 2.9% | |
| R | 317 | 2.9% |
| p | 317 | 2.9% |
| r | 317 | 2.9% |
Most occurring blocks
| Value | Count | Frequency (%) |
| (unknown) | 11052 |
Most frequent character per block
(unknown)
| Value | Count | Frequency (%) |
| e | 3050 | |
| Y | 2416 | |
| s | 2416 | |
| o | 634 | 5.7% |
| t | 634 | 5.7% |
| N | 317 | 2.9% |
| 317 | 2.9% | |
| R | 317 | 2.9% |
| p | 317 | 2.9% |
| r | 317 | 2.9% |
Has Smoked100 Cigarettes_df_pinfo_paciente_specimens
Categorical
High correlation  Imbalance 
| Distinct | 3 |
|---|---|
| Distinct (%) | 0.1% |
| Missing | 0 |
| Missing (%) | 0.0% |
| Memory size | 21.5 KiB |
| No | |
|---|---|
| Yes | 216 |
| Not Provided | 3 |
Length
| Max length | 12 |
|---|---|
| Median length | 2 |
| Mean length | 2.090011 |
| Min length | 2 |
Unique
| Unique | 0 ? |
|---|---|
| Unique (%) | 0.0% |
Sample
| 1st row | No |
|---|---|
| 2nd row | No |
| 3rd row | No |
| 4th row | No |
| 5th row | No |
Common Values
| Value | Count | Frequency (%) |
| No | 2514 | |
| Yes | 216 | 7.9% |
| Not Provided | 3 | 0.1% |
Length
Common Values (Plot)
| Value | Count | Frequency (%) |
| no | 2514 | |
| yes | 216 | 7.9% |
| not | 3 | 0.1% |
| provided | 3 | 0.1% |
Most occurring characters
| Value | Count | Frequency (%) |
| o | 2520 | |
| N | 2517 | |
| e | 219 | 3.8% |
| Y | 216 | 3.8% |
| s | 216 | 3.8% |
| d | 6 | 0.1% |
| 3 | 0.1% | |
| t | 3 | 0.1% |
| P | 3 | 0.1% |
| r | 3 | 0.1% |
| Other values (2) | 6 | 0.1% |
Most occurring categories
| Value | Count | Frequency (%) |
| (unknown) | 5712 |
Most frequent character per category
(unknown)
| Value | Count | Frequency (%) |
| o | 2520 | |
| N | 2517 | |
| e | 219 | 3.8% |
| Y | 216 | 3.8% |
| s | 216 | 3.8% |
| d | 6 | 0.1% |
| 3 | 0.1% | |
| t | 3 | 0.1% |
| P | 3 | 0.1% |
| r | 3 | 0.1% |
| Other values (2) | 6 | 0.1% |
Most occurring scripts
| Value | Count | Frequency (%) |
| (unknown) | 5712 |
Most frequent character per script
(unknown)
| Value | Count | Frequency (%) |
| o | 2520 | |
| N | 2517 | |
| e | 219 | 3.8% |
| Y | 216 | 3.8% |
| s | 216 | 3.8% |
| d | 6 | 0.1% |
| 3 | 0.1% | |
| t | 3 | 0.1% |
| P | 3 | 0.1% |
| r | 3 | 0.1% |
| Other values (2) | 6 | 0.1% |
Most occurring blocks
| Value | Count | Frequency (%) |
| (unknown) | 5712 |
Most frequent character per block
(unknown)
| Value | Count | Frequency (%) |
| o | 2520 | |
| N | 2517 | |
| e | 219 | 3.8% |
| Y | 216 | 3.8% |
| s | 216 | 3.8% |
| d | 6 | 0.1% |
| 3 | 0.1% | |
| t | 3 | 0.1% |
| P | 3 | 0.1% |
| r | 3 | 0.1% |
| Other values (2) | 6 | 0.1% |
InferredAncestry_df_pinfo_paciente_specimens
Categorical
High correlation  Imbalance 
| Distinct | 4 |
|---|---|
| Distinct (%) | 0.1% |
| Missing | 0 |
| Missing (%) | 0.0% |
| Memory size | 21.5 KiB |
| European (CEU) | |
|---|---|
| West African (YRI) | 236 |
| Not Applicable | 4 |
| Mixed (All < 80%) | 3 |
Length
| Max length | 18 |
|---|---|
| Median length | 14 |
| Mean length | 14.348701 |
| Min length | 14 |
Unique
| Unique | 0 ? |
|---|---|
| Unique (%) | 0.0% |
Sample
| 1st row | European (CEU) |
|---|---|
| 2nd row | European (CEU) |
| 3rd row | European (CEU) |
| 4th row | European (CEU) |
| 5th row | European (CEU) |
Common Values
| Value | Count | Frequency (%) |
| European (CEU) | 2490 | |
| West African (YRI) | 236 | 8.6% |
| Not Applicable | 4 | 0.1% |
| Mixed (All < 80%) | 3 | 0.1% |
Length
Common Values (Plot)
| Value | Count | Frequency (%) |
| european | 2490 | |
| ceu | 2490 | |
| west | 236 | 4.1% |
| african | 236 | 4.1% |
| yri | 236 | 4.1% |
| not | 4 | 0.1% |
| applicable | 4 | 0.1% |
| mixed | 3 | 0.1% |
| all | 3 | 0.1% |
| 3 | 0.1% |
Most occurring characters
| Value | Count | Frequency (%) |
| E | 4980 | |
| 2975 | 7.6% | |
| e | 2733 | 7.0% |
| a | 2730 | 7.0% |
| ( | 2729 | 7.0% |
| ) | 2729 | 7.0% |
| r | 2726 | 7.0% |
| n | 2726 | 7.0% |
| p | 2498 | 6.4% |
| o | 2494 | 6.4% |
| Other values (23) | 9895 |
Most occurring categories
| Value | Count | Frequency (%) |
| (unknown) | 39215 |
Most frequent character per category
(unknown)
| Value | Count | Frequency (%) |
| E | 4980 | |
| 2975 | 7.6% | |
| e | 2733 | 7.0% |
| a | 2730 | 7.0% |
| ( | 2729 | 7.0% |
| ) | 2729 | 7.0% |
| r | 2726 | 7.0% |
| n | 2726 | 7.0% |
| p | 2498 | 6.4% |
| o | 2494 | 6.4% |
| Other values (23) | 9895 |
Most occurring scripts
| Value | Count | Frequency (%) |
| (unknown) | 39215 |
Most frequent character per script
(unknown)
| Value | Count | Frequency (%) |
| E | 4980 | |
| 2975 | 7.6% | |
| e | 2733 | 7.0% |
| a | 2730 | 7.0% |
| ( | 2729 | 7.0% |
| ) | 2729 | 7.0% |
| r | 2726 | 7.0% |
| n | 2726 | 7.0% |
| p | 2498 | 6.4% |
| o | 2494 | 6.4% |
| Other values (23) | 9895 |
Most occurring blocks
| Value | Count | Frequency (%) |
| (unknown) | 39215 |
Most frequent character per block
(unknown)
| Value | Count | Frequency (%) |
| E | 4980 | |
| 2975 | 7.6% | |
| e | 2733 | 7.0% |
| a | 2730 | 7.0% |
| ( | 2729 | 7.0% |
| ) | 2729 | 7.0% |
| r | 2726 | 7.0% |
| n | 2726 | 7.0% |
| p | 2498 | 6.4% |
| o | 2494 | 6.4% |
| Other values (23) | 9895 |
Molecular andIHC Data_df_pinfo_paciente_specimens
Categorical
High correlation  Imbalance  Missing 
| Distinct | 5 |
|---|---|
| Distinct (%) | 0.2% |
| Missing | 335 |
| Missing (%) | 12.3% |
| Memory size | 21.5 KiB |
| IHC: DOG1+, CD117+; S100-, CK AE1/AE3- | |
|---|---|
| Biomarkers: c-KIT mutated, DOG1+ | 108 |
| IHC (from 10/2013 primary diagnosis): CKIT+, CD34+, BCL2+, CDX2 -, CK7 -, CK20 -, Melan-A -, S-100 -, Vimentin -. PDGFRA exon 12 &18 mutation negative. | 98 |
| IHC: DOG1+, CD117+, and PDGFR+ consistent with a gastrointestinal stromal tumor (GIST). | 84 |
| c.445C>T (p.Q149*) variant in the SDHB gene | 2 |
Length
| Max length | 152 |
|---|---|
| Median length | 38 |
| Mean length | 44.189324 |
| Min length | 33 |
Unique
| Unique | 0 ? |
|---|---|
| Unique (%) | 0.0% |
Sample
| 1st row | IHC: DOG1+, CD117+; S100-, CK AE1/AE3- |
|---|---|
| 2nd row | IHC: DOG1+, CD117+; S100-, CK AE1/AE3- |
| 3rd row | IHC: DOG1+, CD117+; S100-, CK AE1/AE3- |
| 4th row | IHC: DOG1+, CD117+; S100-, CK AE1/AE3- |
| 5th row | IHC: DOG1+, CD117+; S100-, CK AE1/AE3- |
Common Values
| Value | Count | Frequency (%) |
| IHC: DOG1+, CD117+; S100-, CK AE1/AE3- | 2106 | |
| Biomarkers: c-KIT mutated, DOG1+ | 108 | 4.0% |
| IHC (from 10/2013 primary diagnosis): CKIT+, CD34+, BCL2+, CDX2 -, CK7 -, CK20 -, Melan-A -, S-100 -, Vimentin -. PDGFRA exon 12 &18 mutation negative. | 98 | 3.6% |
| IHC: DOG1+, CD117+, and PDGFR+ consistent with a gastrointestinal stromal tumor (GIST). | 84 | 3.1% |
| c.445C>T (p.Q149*) variant in the SDHB gene | 2 | 0.1% |
| (Missing) | 335 | 12.3% |
Length
Common Values (Plot)
| Value | Count | Frequency (%) |
| dog1 | 2298 | |
| ihc | 2288 | |
| cd117 | 2190 | |
| s100 | 2106 | |
| ck | 2106 | |
| ae1/ae3 | 2106 | |
| 588 | 3.5% | |
| c-kit | 108 | 0.6% |
| biomarkers | 108 | 0.6% |
| mutated | 108 | 0.6% |
| Other values (35) | 2632 |
Most occurring characters
| Value | Count | Frequency (%) |
| 14530 | 13.7% | |
| 1 | 11382 | 10.7% |
| C | 7174 | 6.8% |
| , | 5272 | 5.0% |
| - | 5104 | 4.8% |
| D | 4868 | 4.6% |
| + | 4866 | 4.6% |
| 0 | 4702 | 4.4% |
| A | 4408 | 4.2% |
| E | 4212 | 4.0% |
| Other values (54) | 39448 |
Most occurring categories
| Value | Count | Frequency (%) |
| (unknown) | 105966 |
Most frequent character per category
(unknown)
| Value | Count | Frequency (%) |
| 14530 | 13.7% | |
| 1 | 11382 | 10.7% |
| C | 7174 | 6.8% |
| , | 5272 | 5.0% |
| - | 5104 | 4.8% |
| D | 4868 | 4.6% |
| + | 4866 | 4.6% |
| 0 | 4702 | 4.4% |
| A | 4408 | 4.2% |
| E | 4212 | 4.0% |
| Other values (54) | 39448 |
Most occurring scripts
| Value | Count | Frequency (%) |
| (unknown) | 105966 |
Most frequent character per script
(unknown)
| Value | Count | Frequency (%) |
| 14530 | 13.7% | |
| 1 | 11382 | 10.7% |
| C | 7174 | 6.8% |
| , | 5272 | 5.0% |
| - | 5104 | 4.8% |
| D | 4868 | 4.6% |
| + | 4866 | 4.6% |
| 0 | 4702 | 4.4% |
| A | 4408 | 4.2% |
| E | 4212 | 4.0% |
| Other values (54) | 39448 |
Most occurring blocks
| Value | Count | Frequency (%) |
| (unknown) | 105966 |
Most frequent character per block
(unknown)
| Value | Count | Frequency (%) |
| 14530 | 13.7% | |
| 1 | 11382 | 10.7% |
| C | 7174 | 6.8% |
| , | 5272 | 5.0% |
| - | 5104 | 4.8% |
| D | 4868 | 4.6% |
| + | 4866 | 4.6% |
| 0 | 4702 | 4.4% |
| A | 4408 | 4.2% |
| E | 4212 | 4.0% |
| Other values (54) | 39448 |
Occupation_df_pinfo_paciente_specimens
Categorical
High correlation  Imbalance 
| Distinct | 9 |
|---|---|
| Distinct (%) | 0.3% |
| Missing | 3 |
| Missing (%) | 0.1% |
| Memory size | 21.5 KiB |
| Engineer | |
|---|---|
| Park Service | 200 |
| Disabled | 128 |
| Not Provided | 108 |
| Unknown | 98 |
| Other values (4) | 90 |
Length
| Max length | 39 |
|---|---|
| Median length | 8 |
| Mean length | 8.9531136 |
| Min length | 7 |
Unique
| Unique | 0 ? |
|---|---|
| Unique (%) | 0.0% |
Sample
| 1st row | Engineer |
|---|---|
| 2nd row | Engineer |
| 3rd row | Engineer |
| 4th row | Engineer |
| 5th row | Engineer |
Common Values
| Value | Count | Frequency (%) |
| Engineer | 2106 | |
| Park Service | 200 | 7.3% |
| Disabled | 128 | 4.7% |
| Not Provided | 108 | 4.0% |
| Unknown | 98 | 3.6% |
| Plastics factory worker | 84 | 3.1% |
| insurance industry | 2 | 0.1% |
| Department Manger | 2 | 0.1% |
| Retired; prior occupation not provided | 2 | 0.1% |
| (Missing) | 3 | 0.1% |
Length
Common Values (Plot)
| Value | Count | Frequency (%) |
| engineer | 2106 | |
| park | 200 | 6.2% |
| service | 200 | 6.2% |
| disabled | 128 | 4.0% |
| not | 110 | 3.4% |
| provided | 110 | 3.4% |
| unknown | 98 | 3.0% |
| plastics | 84 | 2.6% |
| factory | 84 | 2.6% |
| worker | 84 | 2.6% |
| Other values (7) | 14 | 0.4% |
Most occurring characters
| Value | Count | Frequency (%) |
| e | 4946 | |
| n | 4520 | |
| r | 2882 | |
| i | 2638 | |
| g | 2108 | |
| E | 2106 | |
| 598 | 2.4% | |
| a | 504 | 2.1% |
| o | 492 | 2.0% |
| P | 392 | 1.6% |
| Other values (21) | 3256 |
Most occurring categories
| Value | Count | Frequency (%) |
| (unknown) | 24442 |
Most frequent character per category
(unknown)
| Value | Count | Frequency (%) |
| e | 4946 | |
| n | 4520 | |
| r | 2882 | |
| i | 2638 | |
| g | 2108 | |
| E | 2106 | |
| 598 | 2.4% | |
| a | 504 | 2.1% |
| o | 492 | 2.0% |
| P | 392 | 1.6% |
| Other values (21) | 3256 |
Most occurring scripts
| Value | Count | Frequency (%) |
| (unknown) | 24442 |
Most frequent character per script
(unknown)
| Value | Count | Frequency (%) |
| e | 4946 | |
| n | 4520 | |
| r | 2882 | |
| i | 2638 | |
| g | 2108 | |
| E | 2106 | |
| 598 | 2.4% | |
| a | 504 | 2.1% |
| o | 492 | 2.0% |
| P | 392 | 1.6% |
| Other values (21) | 3256 |
Most occurring blocks
| Value | Count | Frequency (%) |
| (unknown) | 24442 |
Most frequent character per block
(unknown)
| Value | Count | Frequency (%) |
| e | 4946 | |
| n | 4520 | |
| r | 2882 | |
| i | 2638 | |
| g | 2108 | |
| E | 2106 | |
| 598 | 2.4% | |
| a | 504 | 2.1% |
| o | 492 | 2.0% |
| P | 392 | 1.6% |
| Other values (21) | 3256 |
PatientNotes_df_pinfo_paciente_specimens
Categorical
High correlation  Imbalance  Missing 
| Distinct | 7 |
|---|---|
| Distinct (%) | 0.3% |
| Missing | 331 |
| Missing (%) | 12.1% |
| Memory size | 21.5 KiB |
| Tumor Grade/Stage: cM0 (at diagnosis); high grade Location of known metastasis: liver, jejunum, ileum | |
|---|---|
| Disease recurrence at distant site Tumor Grade/Stage: Grade 2, T2N0M1 | 108 |
| Tumor Grade/Stage: High grade, T4NXM1 | 98 |
| Location of know metastases: liver | 84 |
| Pt has concurrent malignancies - GIST and SDHB gene mutation associated paraganglioma | 2 |
| Other values (2) | 4 |
Length
| Max length | 102 |
|---|---|
| Median length | 102 |
| Mean length | 95.62448 |
| Min length | 26 |
Unique
| Unique | 0 ? |
|---|---|
| Unique (%) | 0.0% |
Sample
| 1st row | Tumor Grade/Stage: cM0 (at diagnosis); high grade Location of known metastasis: liver, jejunum, ileum |
|---|---|
| 2nd row | Tumor Grade/Stage: cM0 (at diagnosis); high grade Location of known metastasis: liver, jejunum, ileum |
| 3rd row | Tumor Grade/Stage: cM0 (at diagnosis); high grade Location of known metastasis: liver, jejunum, ileum |
| 4th row | Tumor Grade/Stage: cM0 (at diagnosis); high grade Location of known metastasis: liver, jejunum, ileum |
| 5th row | Tumor Grade/Stage: cM0 (at diagnosis); high grade Location of known metastasis: liver, jejunum, ileum |
Common Values
| Value | Count | Frequency (%) |
| Tumor Grade/Stage: cM0 (at diagnosis); high grade Location of known metastasis: liver, jejunum, ileum | 2106 | |
| Disease recurrence at distant site Tumor Grade/Stage: Grade 2, T2N0M1 | 108 | 4.0% |
| Tumor Grade/Stage: High grade, T4NXM1 | 98 | 3.6% |
| Location of know metastases: liver | 84 | 3.1% |
| Pt has concurrent malignancies - GIST and SDHB gene mutation associated paraganglioma | 2 | 0.1% |
| Tumor Stage/Grade: G1 - 1 low grade; pT3 pN0 pM not applicable | 2 | 0.1% |
| Tumor Grade/Stage: pT2NX | 2 | 0.1% |
| (Missing) | 331 | 12.1% |
Length
Common Values (Plot)
| Value | Count | Frequency (%) |
| tumor | 2316 | 7.3% |
| grade/stage | 2314 | 7.3% |
| grade | 2314 | 7.3% |
| at | 2214 | 7.0% |
| high | 2204 | 7.0% |
| liver | 2190 | 6.9% |
| of | 2190 | 6.9% |
| location | 2190 | 6.9% |
| cm0 | 2106 | 6.7% |
| diagnosis | 2106 | 6.7% |
| Other values (35) | 9384 |
Most occurring characters
| Value | Count | Frequency (%) |
| 29020 | 12.6% | |
| a | 18078 | 7.9% |
| e | 16282 | 7.1% |
| i | 15344 | 6.7% |
| o | 13194 | 5.7% |
| t | 11436 | 5.0% |
| s | 11222 | 4.9% |
| n | 10932 | 4.8% |
| r | 9466 | 4.1% |
| g | 8840 | 3.8% |
| Other values (38) | 85876 |
Most occurring categories
| Value | Count | Frequency (%) |
| (unknown) | 229690 |
Most frequent character per category
(unknown)
| Value | Count | Frequency (%) |
| 29020 | 12.6% | |
| a | 18078 | 7.9% |
| e | 16282 | 7.1% |
| i | 15344 | 6.7% |
| o | 13194 | 5.7% |
| t | 11436 | 5.0% |
| s | 11222 | 4.9% |
| n | 10932 | 4.8% |
| r | 9466 | 4.1% |
| g | 8840 | 3.8% |
| Other values (38) | 85876 |
Most occurring scripts
| Value | Count | Frequency (%) |
| (unknown) | 229690 |
Most frequent character per script
(unknown)
| Value | Count | Frequency (%) |
| 29020 | 12.6% | |
| a | 18078 | 7.9% |
| e | 16282 | 7.1% |
| i | 15344 | 6.7% |
| o | 13194 | 5.7% |
| t | 11436 | 5.0% |
| s | 11222 | 4.9% |
| n | 10932 | 4.8% |
| r | 9466 | 4.1% |
| g | 8840 | 3.8% |
| Other values (38) | 85876 |
Most occurring blocks
| Value | Count | Frequency (%) |
| (unknown) | 229690 |
Most frequent character per block
(unknown)
| Value | Count | Frequency (%) |
| 29020 | 12.6% | |
| a | 18078 | 7.9% |
| e | 16282 | 7.1% |
| i | 15344 | 6.7% |
| o | 13194 | 5.7% |
| t | 11436 | 5.0% |
| s | 11222 | 4.9% |
| n | 10932 | 4.8% |
| r | 9466 | 4.1% |
| g | 8840 | 3.8% |
| Other values (38) | 85876 |
Race_df_pinfo_paciente_specimens
Categorical
High correlation  Imbalance 
| Distinct | 3 |
|---|---|
| Distinct (%) | 0.1% |
| Missing | 0 |
| Missing (%) | 0.0% |
| Memory size | 21.5 KiB |
| White | |
|---|---|
| Black or African American | 236 |
| Not Provided | 3 |
Length
| Max length | 25 |
|---|---|
| Median length | 5 |
| Mean length | 6.7347237 |
| Min length | 5 |
Unique
| Unique | 0 ? |
|---|---|
| Unique (%) | 0.0% |
Sample
| 1st row | White |
|---|---|
| 2nd row | White |
| 3rd row | White |
| 4th row | White |
| 5th row | White |
Common Values
| Value | Count | Frequency (%) |
| White | 2494 | |
| Black or African American | 236 | 8.6% |
| Not Provided | 3 | 0.1% |
Length
Common Values (Plot)
| Value | Count | Frequency (%) |
| white | 2494 | |
| black | 236 | 6.9% |
| or | 236 | 6.9% |
| african | 236 | 6.9% |
| american | 236 | 6.9% |
| not | 3 | 0.1% |
| provided | 3 | 0.1% |
Most occurring characters
| Value | Count | Frequency (%) |
| i | 2969 | |
| e | 2733 | |
| t | 2497 | |
| W | 2494 | |
| h | 2494 | |
| r | 711 | 3.9% |
| 711 | 3.9% | |
| c | 708 | 3.8% |
| a | 708 | 3.8% |
| n | 472 | 2.6% |
| Other values (11) | 1909 |
Most occurring categories
| Value | Count | Frequency (%) |
| (unknown) | 18406 |
Most frequent character per category
(unknown)
| Value | Count | Frequency (%) |
| i | 2969 | |
| e | 2733 | |
| t | 2497 | |
| W | 2494 | |
| h | 2494 | |
| r | 711 | 3.9% |
| 711 | 3.9% | |
| c | 708 | 3.8% |
| a | 708 | 3.8% |
| n | 472 | 2.6% |
| Other values (11) | 1909 |
Most occurring scripts
| Value | Count | Frequency (%) |
| (unknown) | 18406 |
Most frequent character per script
(unknown)
| Value | Count | Frequency (%) |
| i | 2969 | |
| e | 2733 | |
| t | 2497 | |
| W | 2494 | |
| h | 2494 | |
| r | 711 | 3.9% |
| 711 | 3.9% | |
| c | 708 | 3.8% |
| a | 708 | 3.8% |
| n | 472 | 2.6% |
| Other values (11) | 1909 |
Most occurring blocks
| Value | Count | Frequency (%) |
| (unknown) | 18406 |
Most frequent character per block
(unknown)
| Value | Count | Frequency (%) |
| i | 2969 | |
| e | 2733 | |
| t | 2497 | |
| W | 2494 | |
| h | 2494 | |
| r | 711 | 3.9% |
| 711 | 3.9% | |
| c | 708 | 3.8% |
| a | 708 | 3.8% |
| n | 472 | 2.6% |
| Other values (11) | 1909 |
Specimen ID
Categorical
High correlation  Imbalance 
| Distinct | 10 |
|---|---|
| Distinct (%) | 0.4% |
| Missing | 0 |
| Missing (%) | 0.0% |
| Memory size | 21.5 KiB |
| 319-R | |
|---|---|
| 101-R | 200 |
| 202-R | 128 |
| 196-R | 108 |
| 082-R | 98 |
| Other values (5) | 93 |
Length
| Max length | 6 |
|---|---|
| Median length | 5 |
| Mean length | 5.0007318 |
| Min length | 5 |
Unique
| Unique | 0 ? |
|---|---|
| Unique (%) | 0.0% |
Sample
| 1st row | 319-R |
|---|---|
| 2nd row | 319-R |
| 3rd row | 319-R |
| 4th row | 319-R |
| 5th row | 319-R |
Common Values
| Value | Count | Frequency (%) |
| 319-R | 2106 | |
| 101-R | 200 | 7.3% |
| 202-R | 128 | 4.7% |
| 196-R | 108 | 4.0% |
| 082-R | 98 | 3.6% |
| 013-R | 84 | 3.1% |
| 008-R | 3 | 0.1% |
| 235-R1 | 2 | 0.1% |
| 109-R | 2 | 0.1% |
| 194-R | 2 | 0.1% |
Length
Common Values (Plot)
| Value | Count | Frequency (%) |
| 319-r | 2106 | |
| 101-r | 200 | 7.3% |
| 202-r | 128 | 4.7% |
| 196-r | 108 | 4.0% |
| 082-r | 98 | 3.6% |
| 013-r | 84 | 3.1% |
| 008-r | 3 | 0.1% |
| 235-r1 | 2 | 0.1% |
| 109-r | 2 | 0.1% |
| 194-r | 2 | 0.1% |
Most occurring characters
| Value | Count | Frequency (%) |
| - | 2733 | |
| R | 2733 | |
| 1 | 2704 | |
| 9 | 2218 | |
| 3 | 2192 | |
| 0 | 518 | 3.8% |
| 2 | 356 | 2.6% |
| 6 | 108 | 0.8% |
| 8 | 101 | 0.7% |
| 5 | 2 | < 0.1% |
Most occurring categories
| Value | Count | Frequency (%) |
| (unknown) | 13667 |
Most frequent character per category
(unknown)
| Value | Count | Frequency (%) |
| - | 2733 | |
| R | 2733 | |
| 1 | 2704 | |
| 9 | 2218 | |
| 3 | 2192 | |
| 0 | 518 | 3.8% |
| 2 | 356 | 2.6% |
| 6 | 108 | 0.8% |
| 8 | 101 | 0.7% |
| 5 | 2 | < 0.1% |
Most occurring scripts
| Value | Count | Frequency (%) |
| (unknown) | 13667 |
Most frequent character per script
(unknown)
| Value | Count | Frequency (%) |
| - | 2733 | |
| R | 2733 | |
| 1 | 2704 | |
| 9 | 2218 | |
| 3 | 2192 | |
| 0 | 518 | 3.8% |
| 2 | 356 | 2.6% |
| 6 | 108 | 0.8% |
| 8 | 101 | 0.7% |
| 5 | 2 | < 0.1% |
Most occurring blocks
| Value | Count | Frequency (%) |
| (unknown) | 13667 |
Most frequent character per block
(unknown)
| Value | Count | Frequency (%) |
| - | 2733 | |
| R | 2733 | |
| 1 | 2704 | |
| 9 | 2218 | |
| 3 | 2192 | |
| 0 | 518 | 3.8% |
| 2 | 356 | 2.6% |
| 6 | 108 | 0.8% |
| 8 | 101 | 0.7% |
| 5 | 2 | < 0.1% |
BiopsySite_specimen_specimens
Categorical
High correlation  Imbalance 
| Distinct | 9 |
|---|---|
| Distinct (%) | 0.3% |
| Missing | 0 |
| Missing (%) | 0.0% |
| Memory size | 21.5 KiB |
| Liver [central] | |
|---|---|
| Gastric Fundus | 200 |
| Abdominal Mass | 128 |
| Stomach [distal] | 108 |
| abdominal mass | 98 |
| Other values (4) | 93 |
Length
| Max length | 16 |
|---|---|
| Median length | 15 |
| Mean length | 14.654592 |
| Min length | 7 |
Unique
| Unique | 0 ? |
|---|---|
| Unique (%) | 0.0% |
Sample
| 1st row | Liver [central] |
|---|---|
| 2nd row | Liver [central] |
| 3rd row | Liver [central] |
| 4th row | Liver [central] |
| 5th row | Liver [central] |
Common Values
| Value | Count | Frequency (%) |
| Liver [central] | 2106 | |
| Gastric Fundus | 200 | 7.3% |
| Abdominal Mass | 128 | 4.7% |
| Stomach [distal] | 108 | 4.0% |
| abdominal mass | 98 | 3.6% |
| Stomach | 86 | 3.1% |
| Stomach/Liver | 3 | 0.1% |
| Gastric | 2 | 0.1% |
| Stomach | 2 | 0.1% |
Length
Common Values (Plot)
| Value | Count | Frequency (%) |
| liver | 2106 | |
| central | 2106 | |
| abdominal | 226 | 4.2% |
| mass | 226 | 4.2% |
| gastric | 202 | 3.8% |
| fundus | 200 | 3.7% |
| stomach | 196 | 3.6% |
| distal | 108 | 2.0% |
| stomach/liver | 3 | 0.1% |
Most occurring characters
| Value | Count | Frequency (%) |
| r | 4417 | |
| e | 4215 | 10.5% |
| a | 3165 | 7.9% |
| 2740 | 6.8% | |
| i | 2645 | 6.6% |
| t | 2615 | 6.5% |
| n | 2532 | 6.3% |
| c | 2507 | 6.3% |
| l | 2440 | 6.1% |
| [ | 2214 | 5.5% |
| Other values (16) | 10561 |
Most occurring categories
| Value | Count | Frequency (%) |
| (unknown) | 40051 |
Most frequent character per category
(unknown)
| Value | Count | Frequency (%) |
| r | 4417 | |
| e | 4215 | 10.5% |
| a | 3165 | 7.9% |
| 2740 | 6.8% | |
| i | 2645 | 6.6% |
| t | 2615 | 6.5% |
| n | 2532 | 6.3% |
| c | 2507 | 6.3% |
| l | 2440 | 6.1% |
| [ | 2214 | 5.5% |
| Other values (16) | 10561 |
Most occurring scripts
| Value | Count | Frequency (%) |
| (unknown) | 40051 |
Most frequent character per script
(unknown)
| Value | Count | Frequency (%) |
| r | 4417 | |
| e | 4215 | 10.5% |
| a | 3165 | 7.9% |
| 2740 | 6.8% | |
| i | 2645 | 6.6% |
| t | 2615 | 6.5% |
| n | 2532 | 6.3% |
| c | 2507 | 6.3% |
| l | 2440 | 6.1% |
| [ | 2214 | 5.5% |
| Other values (16) | 10561 |
Most occurring blocks
| Value | Count | Frequency (%) |
| (unknown) | 40051 |
Most frequent character per block
(unknown)
| Value | Count | Frequency (%) |
| r | 4417 | |
| e | 4215 | 10.5% |
| a | 3165 | 7.9% |
| 2740 | 6.8% | |
| i | 2645 | 6.6% |
| t | 2615 | 6.5% |
| n | 2532 | 6.3% |
| c | 2507 | 6.3% |
| l | 2440 | 6.1% |
| [ | 2214 | 5.5% |
| Other values (16) | 10561 |
DiagnosisSubtype_specimen_specimens
Categorical
High correlation  Imbalance  Missing 
| Distinct | 2 |
|---|---|
| Distinct (%) | 0.1% |
| Missing | 543 |
| Missing (%) | 19.9% |
| Memory size | 21.5 KiB |
| epithelioid type | |
|---|---|
| spindle type | 84 |
Length
| Max length | 16 |
|---|---|
| Median length | 16 |
| Mean length | 15.846575 |
| Min length | 12 |
Unique
| Unique | 0 ? |
|---|---|
| Unique (%) | 0.0% |
Sample
| 1st row | epithelioid type |
|---|---|
| 2nd row | epithelioid type |
| 3rd row | epithelioid type |
| 4th row | epithelioid type |
| 5th row | epithelioid type |
Common Values
| Value | Count | Frequency (%) |
| epithelioid type | 2106 | |
| spindle type | 84 | 3.1% |
| (Missing) | 543 | 19.9% |
Length
Common Values (Plot)
| Value | Count | Frequency (%) |
| type | 2190 | |
| epithelioid | 2106 | |
| spindle | 84 | 1.9% |
Most occurring characters
| Value | Count | Frequency (%) |
| e | 6486 | |
| i | 6402 | |
| p | 4380 | |
| t | 4296 | |
| l | 2190 | 6.3% |
| d | 2190 | 6.3% |
| y | 2190 | 6.3% |
| 2190 | 6.3% | |
| o | 2106 | 6.1% |
| h | 2106 | 6.1% |
| Other values (2) | 168 | 0.5% |
Most occurring categories
| Value | Count | Frequency (%) |
| (unknown) | 34704 |
Most frequent character per category
(unknown)
| Value | Count | Frequency (%) |
| e | 6486 | |
| i | 6402 | |
| p | 4380 | |
| t | 4296 | |
| l | 2190 | 6.3% |
| d | 2190 | 6.3% |
| y | 2190 | 6.3% |
| 2190 | 6.3% | |
| o | 2106 | 6.1% |
| h | 2106 | 6.1% |
| Other values (2) | 168 | 0.5% |
Most occurring scripts
| Value | Count | Frequency (%) |
| (unknown) | 34704 |
Most frequent character per script
(unknown)
| Value | Count | Frequency (%) |
| e | 6486 | |
| i | 6402 | |
| p | 4380 | |
| t | 4296 | |
| l | 2190 | 6.3% |
| d | 2190 | 6.3% |
| y | 2190 | 6.3% |
| 2190 | 6.3% | |
| o | 2106 | 6.1% |
| h | 2106 | 6.1% |
| Other values (2) | 168 | 0.5% |
Most occurring blocks
| Value | Count | Frequency (%) |
| (unknown) | 34704 |
Most frequent character per block
(unknown)
| Value | Count | Frequency (%) |
| e | 6486 | |
| i | 6402 | |
| p | 4380 | |
| t | 4296 | |
| l | 2190 | 6.3% |
| d | 2190 | 6.3% |
| y | 2190 | 6.3% |
| 2190 | 6.3% | |
| o | 2106 | 6.1% |
| h | 2106 | 6.1% |
| Other values (2) | 168 | 0.5% |
PDX GrowthCurve Avail_specimen_specimens
Boolean
High correlation  Imbalance 
| Distinct | 2 |
|---|---|
| Distinct (%) | 0.1% |
| Missing | 0 |
| Missing (%) | 0.0% |
| Memory size | 2.8 KiB |
| True | |
|---|---|
| False | 6 |
| Value | Count | Frequency (%) |
| True | 2727 | |
| False | 6 | 0.2% |
Consensus Whole ExomeSequence Avail_specimen_specimens
Boolean
High correlation  Imbalance 
| Distinct | 2 |
|---|---|
| Distinct (%) | 0.1% |
| Missing | 0 |
| Missing (%) | 0.0% |
| Memory size | 2.8 KiB |
| True | |
|---|---|
| False | 6 |
| Value | Count | Frequency (%) |
| True | 2727 | |
| False | 6 | 0.2% |
MSI Status_specimen_specimens
Categorical
High correlation  Imbalance 
| Distinct | 2 |
|---|---|
| Distinct (%) | 0.1% |
| Missing | 0 |
| Missing (%) | 0.0% |
| Memory size | 21.5 KiB |
| MSI-Stable | |
|---|---|
| Unknown | 6 |
Length
| Max length | 10 |
|---|---|
| Median length | 10 |
| Mean length | 9.9934138 |
| Min length | 7 |
Unique
| Unique | 0 ? |
|---|---|
| Unique (%) | 0.0% |
Sample
| 1st row | MSI-Stable |
|---|---|
| 2nd row | MSI-Stable |
| 3rd row | MSI-Stable |
| 4th row | MSI-Stable |
| 5th row | MSI-Stable |
Common Values
| Value | Count | Frequency (%) |
| MSI-Stable | 2727 | |
| Unknown | 6 | 0.2% |
Length
Common Values (Plot)
| Value | Count | Frequency (%) |
| msi-stable | 2727 | |
| unknown | 6 | 0.2% |
Most occurring characters
| Value | Count | Frequency (%) |
| S | 5454 | |
| M | 2727 | |
| I | 2727 | |
| - | 2727 | |
| t | 2727 | |
| a | 2727 | |
| b | 2727 | |
| l | 2727 | |
| e | 2727 | |
| n | 18 | 0.1% |
| Other values (4) | 24 | 0.1% |
Most occurring categories
| Value | Count | Frequency (%) |
| (unknown) | 27312 |
Most frequent character per category
(unknown)
| Value | Count | Frequency (%) |
| S | 5454 | |
| M | 2727 | |
| I | 2727 | |
| - | 2727 | |
| t | 2727 | |
| a | 2727 | |
| b | 2727 | |
| l | 2727 | |
| e | 2727 | |
| n | 18 | 0.1% |
| Other values (4) | 24 | 0.1% |
Most occurring scripts
| Value | Count | Frequency (%) |
| (unknown) | 27312 |
Most frequent character per script
(unknown)
| Value | Count | Frequency (%) |
| S | 5454 | |
| M | 2727 | |
| I | 2727 | |
| - | 2727 | |
| t | 2727 | |
| a | 2727 | |
| b | 2727 | |
| l | 2727 | |
| e | 2727 | |
| n | 18 | 0.1% |
| Other values (4) | 24 | 0.1% |
Most occurring blocks
| Value | Count | Frequency (%) |
| (unknown) | 27312 |
Most frequent character per block
(unknown)
| Value | Count | Frequency (%) |
| S | 5454 | |
| M | 2727 | |
| I | 2727 | |
| - | 2727 | |
| t | 2727 | |
| a | 2727 | |
| b | 2727 | |
| l | 2727 | |
| e | 2727 | |
| n | 18 | 0.1% |
| Other values (4) | 24 | 0.1% |
| Distinct | 10 |
|---|---|
| Distinct (%) | 0.4% |
| Missing | 0 |
| Missing (%) | 0.0% |
| Memory size | 21.5 KiB |
| Minimum | 2015-01-01 00:00:00 |
|---|---|
| Maximum | 2021-11-01 00:00:00 |
| Invalid dates | 0 |
| Invalid dates (%) | 0.0% |
Human PathogenTesting Summary_specimen_specimens
Categorical
High correlation  Imbalance 
| Distinct | 4 |
|---|---|
| Distinct (%) | 0.1% |
| Missing | 0 |
| Missing (%) | 0.0% |
| Memory size | 21.5 KiB |
| Negative | |
|---|---|
| Negative | 200 |
| Negative | 84 |
| Negative | 3 |
Length
| Max length | 10 |
|---|---|
| Median length | 8 |
| Mean length | 8.1061105 |
| Min length | 8 |
Unique
| Unique | 0 ? |
|---|---|
| Unique (%) | 0.0% |
Sample
| 1st row | Negative |
|---|---|
| 2nd row | Negative |
| 3rd row | Negative |
| 4th row | Negative |
| 5th row | Negative |
Common Values
| Value | Count | Frequency (%) |
| Negative | 2446 | |
| Negative | 200 | 7.3% |
| Negative | 84 | 3.1% |
| Negative | 3 | 0.1% |
Length
Common Values (Plot)
| Value | Count | Frequency (%) |
| negative | 2733 |
Most occurring characters
| Value | Count | Frequency (%) |
| e | 5466 | |
| N | 2733 | |
| g | 2733 | |
| a | 2733 | |
| t | 2733 | |
| i | 2733 | |
| v | 2733 | |
| 203 | 0.9% | |
| 87 | 0.4% |
Most occurring categories
| Value | Count | Frequency (%) |
| (unknown) | 22154 |
Most frequent character per category
(unknown)
| Value | Count | Frequency (%) |
| e | 5466 | |
| N | 2733 | |
| g | 2733 | |
| a | 2733 | |
| t | 2733 | |
| i | 2733 | |
| v | 2733 | |
| 203 | 0.9% | |
| 87 | 0.4% |
Most occurring scripts
| Value | Count | Frequency (%) |
| (unknown) | 22154 |
Most frequent character per script
(unknown)
| Value | Count | Frequency (%) |
| e | 5466 | |
| N | 2733 | |
| g | 2733 | |
| a | 2733 | |
| t | 2733 | |
| i | 2733 | |
| v | 2733 | |
| 203 | 0.9% | |
| 87 | 0.4% |
Most occurring blocks
| Value | Count | Frequency (%) |
| (unknown) | 22154 |
Most frequent character per block
(unknown)
| Value | Count | Frequency (%) |
| e | 5466 | |
| N | 2733 | |
| g | 2733 | |
| a | 2733 | |
| t | 2733 | |
| i | 2733 | |
| v | 2733 | |
| 203 | 0.9% | |
| 87 | 0.4% |
Able to ViablyPassage in nude mice_specimen_specimens
Categorical
High correlation  Imbalance 
| Distinct | 3 |
|---|---|
| Distinct (%) | 0.1% |
| Missing | 0 |
| Missing (%) | 0.0% |
| Memory size | 21.5 KiB |
| Yes | |
|---|---|
| No | 108 |
| Unknown | 107 |
Length
| Max length | 7 |
|---|---|
| Median length | 3 |
| Mean length | 3.1170874 |
| Min length | 2 |
Unique
| Unique | 0 ? |
|---|---|
| Unique (%) | 0.0% |
Sample
| 1st row | Yes |
|---|---|
| 2nd row | Yes |
| 3rd row | Yes |
| 4th row | Yes |
| 5th row | Yes |
Common Values
| Value | Count | Frequency (%) |
| Yes | 2518 | |
| No | 108 | 4.0% |
| Unknown | 107 | 3.9% |
Length
Common Values (Plot)
| Value | Count | Frequency (%) |
| yes | 2518 | |
| no | 108 | 4.0% |
| unknown | 107 | 3.9% |
Most occurring characters
| Value | Count | Frequency (%) |
| Y | 2518 | |
| e | 2518 | |
| s | 2518 | |
| n | 321 | 3.8% |
| o | 215 | 2.5% |
| N | 108 | 1.3% |
| U | 107 | 1.3% |
| k | 107 | 1.3% |
| w | 107 | 1.3% |
Most occurring categories
| Value | Count | Frequency (%) |
| (unknown) | 8519 |
Most frequent character per category
(unknown)
| Value | Count | Frequency (%) |
| Y | 2518 | |
| e | 2518 | |
| s | 2518 | |
| n | 321 | 3.8% |
| o | 215 | 2.5% |
| N | 108 | 1.3% |
| U | 107 | 1.3% |
| k | 107 | 1.3% |
| w | 107 | 1.3% |
Most occurring scripts
| Value | Count | Frequency (%) |
| (unknown) | 8519 |
Most frequent character per script
(unknown)
| Value | Count | Frequency (%) |
| Y | 2518 | |
| e | 2518 | |
| s | 2518 | |
| n | 321 | 3.8% |
| o | 215 | 2.5% |
| N | 108 | 1.3% |
| U | 107 | 1.3% |
| k | 107 | 1.3% |
| w | 107 | 1.3% |
Most occurring blocks
| Value | Count | Frequency (%) |
| (unknown) | 8519 |
Most frequent character per block
(unknown)
| Value | Count | Frequency (%) |
| Y | 2518 | |
| e | 2518 | |
| s | 2518 | |
| n | 321 | 3.8% |
| o | 215 | 2.5% |
| N | 108 | 1.3% |
| U | 107 | 1.3% |
| k | 107 | 1.3% |
| w | 107 | 1.3% |
Age atSampling_specimen_specimens
Real number (ℝ)
High correlation 
| Distinct | 9 |
|---|---|
| Distinct (%) | 0.3% |
| Missing | 0 |
| Missing (%) | 0.0% |
| Infinite | 0 |
| Infinite (%) | 0.0% |
| Mean | 57.607757 |
| Minimum | 32 |
|---|---|
| Maximum | 81 |
| Zeros | 0 |
| Zeros (%) | 0.0% |
| Negative | 0 |
| Negative (%) | 0.0% |
| Memory size | 21.5 KiB |
Quantile statistics
| Minimum | 32 |
|---|---|
| 5-th percentile | 39 |
| Q1 | 59 |
| median | 59 |
| Q3 | 59 |
| 95-th percentile | 67 |
| Maximum | 81 |
| Range | 49 |
| Interquartile range (IQR) | 0 |
Descriptive statistics
| Standard deviation | 6.8836151 |
|---|---|
| Coefficient of variation (CV) | 0.11949111 |
| Kurtosis | 3.3487549 |
| Mean | 57.607757 |
| Median Absolute Deviation (MAD) | 0 |
| Skewness | -1.8342077 |
| Sum | 157442 |
| Variance | 47.384156 |
| Monotonicity | Not monotonic |
| Value | Count | Frequency (%) |
| 59 | 2106 | |
| 39 | 284 | 10.4% |
| 60 | 128 | 4.7% |
| 67 | 108 | 4.0% |
| 69 | 98 | 3.6% |
| 32 | 3 | 0.1% |
| 52 | 2 | 0.1% |
| 36 | 2 | 0.1% |
| 81 | 2 | 0.1% |
| Value | Count | Frequency (%) |
| 32 | 3 | 0.1% |
| 36 | 2 | 0.1% |
| 39 | 284 | 10.4% |
| 52 | 2 | 0.1% |
| 59 | 2106 | |
| 60 | 128 | 4.7% |
| 67 | 108 | 4.0% |
| 69 | 98 | 3.6% |
| 81 | 2 | 0.1% |
| Value | Count | Frequency (%) |
| 81 | 2 | 0.1% |
| 69 | 98 | 3.6% |
| 67 | 108 | 4.0% |
| 60 | 128 | 4.7% |
| 59 | 2106 | |
| 52 | 2 | 0.1% |
| 39 | 284 | 10.4% |
| 36 | 2 | 0.1% |
| 32 | 3 | 0.1% |
ModelNotes_specimen_specimens
Categorical
High correlation  Imbalance  Missing 
| Distinct | 3 |
|---|---|
| Distinct (%) | 0.1% |
| Missing | 513 |
| Missing (%) | 18.8% |
| Memory size | 21.5 KiB |
| PDX IHC/Path: CD34+ (diffusely), SMA+ (rare cells) | |
|---|---|
| PDX Model Derivation: P0 slow growth; material pooled from Day 300 tumor due to age-related mortality and implanted into P1. | 108 |
| No PDX Growth | 6 |
Length
| Max length | 124 |
|---|---|
| Median length | 50 |
| Mean length | 53.502703 |
| Min length | 14 |
Unique
| Unique | 0 ? |
|---|---|
| Unique (%) | 0.0% |
Sample
| 1st row | PDX IHC/Path: CD34+ (diffusely), SMA+ (rare cells) |
|---|---|
| 2nd row | PDX IHC/Path: CD34+ (diffusely), SMA+ (rare cells) |
| 3rd row | PDX IHC/Path: CD34+ (diffusely), SMA+ (rare cells) |
| 4th row | PDX IHC/Path: CD34+ (diffusely), SMA+ (rare cells) |
| 5th row | PDX IHC/Path: CD34+ (diffusely), SMA+ (rare cells) |
Common Values
| Value | Count | Frequency (%) |
| PDX IHC/Path: CD34+ (diffusely), SMA+ (rare cells) | 2106 | |
| PDX Model Derivation: P0 slow growth; material pooled from Day 300 tumor due to age-related mortality and implanted into P1. | 108 | 4.0% |
| No PDX Growth | 6 | 0.2% |
| (Missing) | 513 | 18.8% |
Length
Common Values (Plot)
| Value | Count | Frequency (%) |
| pdx | 2220 | |
| ihc/path | 2106 | |
| cd34 | 2106 | |
| diffusely | 2106 | |
| sma | 2106 | |
| rare | 2106 | |
| cells | 2106 | |
| growth | 114 | 0.7% |
| model | 108 | 0.6% |
| p0 | 108 | 0.6% |
| Other values (17) | 1734 |
Most occurring characters
| Value | Count | Frequency (%) |
| 14706 | 12.4% | |
| e | 7290 | 6.1% |
| l | 7074 | 6.0% |
| a | 5184 | 4.4% |
| r | 4974 | 4.2% |
| D | 4542 | 3.8% |
| P | 4542 | 3.8% |
| s | 4320 | 3.6% |
| f | 4320 | 3.6% |
| ) | 4212 | 3.5% |
| Other values (35) | 57612 |
Most occurring categories
| Value | Count | Frequency (%) |
| (unknown) | 118776 |
Most frequent character per category
(unknown)
| Value | Count | Frequency (%) |
| 14706 | 12.4% | |
| e | 7290 | 6.1% |
| l | 7074 | 6.0% |
| a | 5184 | 4.4% |
| r | 4974 | 4.2% |
| D | 4542 | 3.8% |
| P | 4542 | 3.8% |
| s | 4320 | 3.6% |
| f | 4320 | 3.6% |
| ) | 4212 | 3.5% |
| Other values (35) | 57612 |
Most occurring scripts
| Value | Count | Frequency (%) |
| (unknown) | 118776 |
Most frequent character per script
(unknown)
| Value | Count | Frequency (%) |
| 14706 | 12.4% | |
| e | 7290 | 6.1% |
| l | 7074 | 6.0% |
| a | 5184 | 4.4% |
| r | 4974 | 4.2% |
| D | 4542 | 3.8% |
| P | 4542 | 3.8% |
| s | 4320 | 3.6% |
| f | 4320 | 3.6% |
| ) | 4212 | 3.5% |
| Other values (35) | 57612 |
Most occurring blocks
| Value | Count | Frequency (%) |
| (unknown) | 118776 |
Most frequent character per block
(unknown)
| Value | Count | Frequency (%) |
| 14706 | 12.4% | |
| e | 7290 | 6.1% |
| l | 7074 | 6.0% |
| a | 5184 | 4.4% |
| r | 4974 | 4.2% |
| D | 4542 | 3.8% |
| P | 4542 | 3.8% |
| s | 4320 | 3.6% |
| f | 4320 | 3.6% |
| ) | 4212 | 3.5% |
| Other values (35) | 57612 |
ProvidedTissue Origin_specimen_specimens
Categorical
High correlation 
| Distinct | 2 |
|---|---|
| Distinct (%) | 0.1% |
| Missing | 0 |
| Missing (%) | 0.0% |
| Memory size | 21.5 KiB |
| Metastatic Site | |
|---|---|
| Primary |
Length
| Max length | 15 |
|---|---|
| Median length | 15 |
| Mean length | 13.164654 |
| Min length | 7 |
Unique
| Unique | 0 ? |
|---|---|
| Unique (%) | 0.0% |
Sample
| 1st row | Metastatic Site |
|---|---|
| 2nd row | Metastatic Site |
| 3rd row | Metastatic Site |
| 4th row | Metastatic Site |
| 5th row | Metastatic Site |
Common Values
| Value | Count | Frequency (%) |
| Metastatic Site | 2106 | |
| Primary | 627 | 22.9% |
Length
Common Values (Plot)
| Value | Count | Frequency (%) |
| metastatic | 2106 | |
| site | 2106 | |
| primary | 627 | 13.0% |
Most occurring characters
| Value | Count | Frequency (%) |
| t | 8424 | |
| a | 4839 | |
| i | 4839 | |
| e | 4212 | |
| M | 2106 | 5.9% |
| s | 2106 | 5.9% |
| c | 2106 | 5.9% |
| 2106 | 5.9% | |
| S | 2106 | 5.9% |
| r | 1254 | 3.5% |
| Other values (3) | 1881 | 5.2% |
Most occurring categories
| Value | Count | Frequency (%) |
| (unknown) | 35979 |
Most frequent character per category
(unknown)
| Value | Count | Frequency (%) |
| t | 8424 | |
| a | 4839 | |
| i | 4839 | |
| e | 4212 | |
| M | 2106 | 5.9% |
| s | 2106 | 5.9% |
| c | 2106 | 5.9% |
| 2106 | 5.9% | |
| S | 2106 | 5.9% |
| r | 1254 | 3.5% |
| Other values (3) | 1881 | 5.2% |
Most occurring scripts
| Value | Count | Frequency (%) |
| (unknown) | 35979 |
Most frequent character per script
(unknown)
| Value | Count | Frequency (%) |
| t | 8424 | |
| a | 4839 | |
| i | 4839 | |
| e | 4212 | |
| M | 2106 | 5.9% |
| s | 2106 | 5.9% |
| c | 2106 | 5.9% |
| 2106 | 5.9% | |
| S | 2106 | 5.9% |
| r | 1254 | 3.5% |
| Other values (3) | 1881 | 5.2% |
Most occurring blocks
| Value | Count | Frequency (%) |
| (unknown) | 35979 |
Most frequent character per block
(unknown)
| Value | Count | Frequency (%) |
| t | 8424 | |
| a | 4839 | |
| i | 4839 | |
| e | 4212 | |
| M | 2106 | 5.9% |
| s | 2106 | 5.9% |
| c | 2106 | 5.9% |
| 2106 | 5.9% | |
| S | 2106 | 5.9% |
| r | 1254 | 3.5% |
| Other values (3) | 1881 | 5.2% |
Sample ID_samples
Categorical
High correlation 
| Distinct | 44 |
|---|---|
| Distinct (%) | 1.6% |
| Missing | 9 |
| Missing (%) | 0.3% |
| Memory size | 21.5 KiB |
| AH5 | |
|---|---|
| AH5Q86T81 | |
| AH5Q89 | |
| AH6T26 | |
| AH6T28 | |
| Other values (39) |
Length
| Max length | 19 |
|---|---|
| Median length | 16 |
| Mean length | 6.2621145 |
| Min length | 3 |
Unique
| Unique | 0 ? |
|---|---|
| Unique (%) | 0.0% |
Sample
| 1st row | AH5 |
|---|---|
| 2nd row | AH5 |
| 3rd row | AH5 |
| 4th row | AH5 |
| 5th row | AH5 |
Common Values
| Value | Count | Frequency (%) |
| AH5 | 234 | |
| AH5Q86T81 | 234 | |
| AH5Q89 | 234 | |
| AH6T26 | 234 | |
| AH6T28 | 234 | |
| AH8 | 234 | |
| AH8Q94 | 234 | |
| AH9 | 234 | |
| Originator | 234 | |
| ORIGINATOR | 66 | 2.4% |
| Other values (34) | 552 |
Length
| Value | Count | Frequency (%) |
| originator | 300 | |
| ah5q86t81 | 234 | |
| ah5 | 234 | |
| ah5q89 | 234 | |
| ah6t26 | 234 | |
| ah8 | 234 | |
| ah6t28 | 234 | |
| ah8q94 | 234 | |
| ah9 | 234 | |
| vqf | 20 | 0.7% |
| Other values (33) | 532 |
Most occurring characters
| Value | Count | Frequency (%) |
| H | 2072 | 12.1% |
| A | 1986 | 11.6% |
| 8 | 1570 | 9.2% |
| 6 | 1112 | 6.5% |
| Q | 1030 | 6.0% |
| T | 848 | 5.0% |
| 5 | 786 | 4.6% |
| 9 | 752 | 4.4% |
| O | 546 | 3.2% |
| 2 | 504 | 3.0% |
| Other values (31) | 5852 |
Most occurring categories
| Value | Count | Frequency (%) |
| (unknown) | 17058 |
Most frequent character per category
(unknown)
| Value | Count | Frequency (%) |
| H | 2072 | 12.1% |
| A | 1986 | 11.6% |
| 8 | 1570 | 9.2% |
| 6 | 1112 | 6.5% |
| Q | 1030 | 6.0% |
| T | 848 | 5.0% |
| 5 | 786 | 4.6% |
| 9 | 752 | 4.4% |
| O | 546 | 3.2% |
| 2 | 504 | 3.0% |
| Other values (31) | 5852 |
Most occurring scripts
| Value | Count | Frequency (%) |
| (unknown) | 17058 |
Most frequent character per script
(unknown)
| Value | Count | Frequency (%) |
| H | 2072 | 12.1% |
| A | 1986 | 11.6% |
| 8 | 1570 | 9.2% |
| 6 | 1112 | 6.5% |
| Q | 1030 | 6.0% |
| T | 848 | 5.0% |
| 5 | 786 | 4.6% |
| 9 | 752 | 4.4% |
| O | 546 | 3.2% |
| 2 | 504 | 3.0% |
| Other values (31) | 5852 |
Most occurring blocks
| Value | Count | Frequency (%) |
| (unknown) | 17058 |
Most frequent character per block
(unknown)
| Value | Count | Frequency (%) |
| H | 2072 | 12.1% |
| A | 1986 | 11.6% |
| 8 | 1570 | 9.2% |
| 6 | 1112 | 6.5% |
| Q | 1030 | 6.0% |
| T | 848 | 5.0% |
| 5 | 786 | 4.6% |
| 9 | 752 | 4.4% |
| O | 546 | 3.2% |
| 2 | 504 | 3.0% |
| Other values (31) | 5852 |
DiagnosisSubtype_samples
Categorical
High correlation  Imbalance  Missing 
| Distinct | 2 |
|---|---|
| Distinct (%) | 0.1% |
| Missing | 543 |
| Missing (%) | 19.9% |
| Memory size | 21.5 KiB |
| epithelioid type | |
|---|---|
| spindle type | 84 |
Length
| Max length | 16 |
|---|---|
| Median length | 16 |
| Mean length | 15.846575 |
| Min length | 12 |
Unique
| Unique | 0 ? |
|---|---|
| Unique (%) | 0.0% |
Sample
| 1st row | epithelioid type |
|---|---|
| 2nd row | epithelioid type |
| 3rd row | epithelioid type |
| 4th row | epithelioid type |
| 5th row | epithelioid type |
Common Values
| Value | Count | Frequency (%) |
| epithelioid type | 2106 | |
| spindle type | 84 | 3.1% |
| (Missing) | 543 | 19.9% |
Length
Common Values (Plot)
| Value | Count | Frequency (%) |
| type | 2190 | |
| epithelioid | 2106 | |
| spindle | 84 | 1.9% |
Most occurring characters
| Value | Count | Frequency (%) |
| e | 6486 | |
| i | 6402 | |
| p | 4380 | |
| t | 4296 | |
| l | 2190 | 6.3% |
| d | 2190 | 6.3% |
| y | 2190 | 6.3% |
| 2190 | 6.3% | |
| o | 2106 | 6.1% |
| h | 2106 | 6.1% |
| Other values (2) | 168 | 0.5% |
Most occurring categories
| Value | Count | Frequency (%) |
| (unknown) | 34704 |
Most frequent character per category
(unknown)
| Value | Count | Frequency (%) |
| e | 6486 | |
| i | 6402 | |
| p | 4380 | |
| t | 4296 | |
| l | 2190 | 6.3% |
| d | 2190 | 6.3% |
| y | 2190 | 6.3% |
| 2190 | 6.3% | |
| o | 2106 | 6.1% |
| h | 2106 | 6.1% |
| Other values (2) | 168 | 0.5% |
Most occurring scripts
| Value | Count | Frequency (%) |
| (unknown) | 34704 |
Most frequent character per script
(unknown)
| Value | Count | Frequency (%) |
| e | 6486 | |
| i | 6402 | |
| p | 4380 | |
| t | 4296 | |
| l | 2190 | 6.3% |
| d | 2190 | 6.3% |
| y | 2190 | 6.3% |
| 2190 | 6.3% | |
| o | 2106 | 6.1% |
| h | 2106 | 6.1% |
| Other values (2) | 168 | 0.5% |
Most occurring blocks
| Value | Count | Frequency (%) |
| (unknown) | 34704 |
Most frequent character per block
(unknown)
| Value | Count | Frequency (%) |
| e | 6486 | |
| i | 6402 | |
| p | 4380 | |
| t | 4296 | |
| l | 2190 | 6.3% |
| d | 2190 | 6.3% |
| y | 2190 | 6.3% |
| 2190 | 6.3% | |
| o | 2106 | 6.1% |
| h | 2106 | 6.1% |
| Other values (2) | 168 | 0.5% |
Patient/OriginatingSpecimen_samples
Boolean
High correlation 
| Distinct | 2 |
|---|---|
| Distinct (%) | 0.1% |
| Missing | 9 |
| Missing (%) | 0.3% |
| Memory size | 5.5 KiB |
| False | |
|---|---|
| True | |
| (Missing) | 9 |
| Value | Count | Frequency (%) |
| False | 2424 | |
| True | 300 | 11.0% |
| (Missing) | 9 | 0.3% |
Passage_samples
Categorical
High correlation  Missing 
| Distinct | 5 |
|---|---|
| Distinct (%) | 0.2% |
| Missing | 309 |
| Missing (%) | 11.3% |
| Memory size | 21.5 KiB |
| 1.0 | |
|---|---|
| 0.0 | |
| 2.0 | |
| 3.0 | 52 |
| 4.0 | 36 |
Length
| Max length | 3 |
|---|---|
| Median length | 3 |
| Mean length | 3 |
| Min length | 3 |
Unique
| Unique | 0 ? |
|---|---|
| Unique (%) | 0.0% |
Sample
| 1st row | 0.0 |
|---|---|
| 2nd row | 0.0 |
| 3rd row | 0.0 |
| 4th row | 0.0 |
| 5th row | 0.0 |
Common Values
| Value | Count | Frequency (%) |
| 1.0 | 1138 | |
| 0.0 | 848 | |
| 2.0 | 350 | 12.8% |
| 3.0 | 52 | 1.9% |
| 4.0 | 36 | 1.3% |
| (Missing) | 309 | 11.3% |
Length
Common Values (Plot)
| Value | Count | Frequency (%) |
| 1.0 | 1138 | |
| 0.0 | 848 | |
| 2.0 | 350 | 14.4% |
| 3.0 | 52 | 2.1% |
| 4.0 | 36 | 1.5% |
Most occurring characters
| Value | Count | Frequency (%) |
| 0 | 3272 | |
| . | 2424 | |
| 1 | 1138 | 15.6% |
| 2 | 350 | 4.8% |
| 3 | 52 | 0.7% |
| 4 | 36 | 0.5% |
Most occurring categories
| Value | Count | Frequency (%) |
| (unknown) | 7272 |
Most frequent character per category
(unknown)
| Value | Count | Frequency (%) |
| 0 | 3272 | |
| . | 2424 | |
| 1 | 1138 | 15.6% |
| 2 | 350 | 4.8% |
| 3 | 52 | 0.7% |
| 4 | 36 | 0.5% |
Most occurring scripts
| Value | Count | Frequency (%) |
| (unknown) | 7272 |
Most frequent character per script
(unknown)
| Value | Count | Frequency (%) |
| 0 | 3272 | |
| . | 2424 | |
| 1 | 1138 | 15.6% |
| 2 | 350 | 4.8% |
| 3 | 52 | 0.7% |
| 4 | 36 | 0.5% |
Most occurring blocks
| Value | Count | Frequency (%) |
| (unknown) | 7272 |
Most frequent character per block
(unknown)
| Value | Count | Frequency (%) |
| 0 | 3272 | |
| . | 2424 | |
| 1 | 1138 | 15.6% |
| 2 | 350 | 4.8% |
| 3 | 52 | 0.7% |
| 4 | 36 | 0.5% |
PathologyAvail_samples
Boolean
High correlation  Imbalance 
| Distinct | 2 |
|---|---|
| Distinct (%) | 0.1% |
| Missing | 9 |
| Missing (%) | 0.3% |
| Memory size | 5.5 KiB |
| True | |
|---|---|
| False | 12 |
| (Missing) | 9 |
| Value | Count | Frequency (%) |
| True | 2712 | |
| False | 12 | 0.4% |
| (Missing) | 9 | 0.3% |
OncoKB Cancer GenePanel Data Avail_samples
Boolean
High correlation 
| Distinct | 2 |
|---|---|
| Distinct (%) | 0.1% |
| Missing | 9 |
| Missing (%) | 0.3% |
| Memory size | 5.5 KiB |
| True | |
|---|---|
| False | |
| (Missing) | 9 |
| Value | Count | Frequency (%) |
| True | 1886 | |
| False | 838 | |
| (Missing) | 9 | 0.3% |
Whole ExomeSequence Avail_samples
Boolean
High correlation 
| Distinct | 2 |
|---|---|
| Distinct (%) | 0.1% |
| Missing | 9 |
| Missing (%) | 0.3% |
| Memory size | 5.5 KiB |
| True | |
|---|---|
| False | |
| (Missing) | 9 |
| Value | Count | Frequency (%) |
| True | 1886 | |
| False | 838 | |
| (Missing) | 9 | 0.3% |
RNASeqAvail_samples
Boolean
High correlation 
| Distinct | 2 |
|---|---|
| Distinct (%) | 0.1% |
| Missing | 9 |
| Missing (%) | 0.3% |
| Memory size | 5.5 KiB |
| True | |
|---|---|
| False | |
| (Missing) | 9 |
| Value | Count | Frequency (%) |
| True | 1874 | |
| False | 850 | |
| (Missing) | 9 | 0.3% |
PDM Type_samples
Categorical
High correlation 
| Distinct | 2 |
|---|---|
| Distinct (%) | 0.1% |
| Missing | 9 |
| Missing (%) | 0.3% |
| Memory size | 21.5 KiB |
| PDX | |
|---|---|
| Patient/Originator Specimen |
Length
| Max length | 27 |
|---|---|
| Median length | 3 |
| Mean length | 5.6431718 |
| Min length | 3 |
Unique
| Unique | 0 ? |
|---|---|
| Unique (%) | 0.0% |
Sample
| 1st row | PDX |
|---|---|
| 2nd row | PDX |
| 3rd row | PDX |
| 4th row | PDX |
| 5th row | PDX |
Common Values
| Value | Count | Frequency (%) |
| PDX | 2424 | |
| Patient/Originator Specimen | 300 | 11.0% |
| (Missing) | 9 | 0.3% |
Length
Common Values (Plot)
| Value | Count | Frequency (%) |
| pdx | 2424 | |
| patient/originator | 300 | 9.9% |
| specimen | 300 | 9.9% |
Most occurring characters
| Value | Count | Frequency (%) |
| P | 2724 | |
| D | 2424 | |
| X | 2424 | |
| i | 1200 | |
| t | 900 | 5.9% |
| e | 900 | 5.9% |
| n | 900 | 5.9% |
| a | 600 | 3.9% |
| r | 600 | 3.9% |
| / | 300 | 2.0% |
| Other values (8) | 2400 |
Most occurring categories
| Value | Count | Frequency (%) |
| (unknown) | 15372 |
Most frequent character per category
(unknown)
| Value | Count | Frequency (%) |
| P | 2724 | |
| D | 2424 | |
| X | 2424 | |
| i | 1200 | |
| t | 900 | 5.9% |
| e | 900 | 5.9% |
| n | 900 | 5.9% |
| a | 600 | 3.9% |
| r | 600 | 3.9% |
| / | 300 | 2.0% |
| Other values (8) | 2400 |
Most occurring scripts
| Value | Count | Frequency (%) |
| (unknown) | 15372 |
Most frequent character per script
(unknown)
| Value | Count | Frequency (%) |
| P | 2724 | |
| D | 2424 | |
| X | 2424 | |
| i | 1200 | |
| t | 900 | 5.9% |
| e | 900 | 5.9% |
| n | 900 | 5.9% |
| a | 600 | 3.9% |
| r | 600 | 3.9% |
| / | 300 | 2.0% |
| Other values (8) | 2400 |
Most occurring blocks
| Value | Count | Frequency (%) |
| (unknown) | 15372 |
Most frequent character per block
(unknown)
| Value | Count | Frequency (%) |
| P | 2724 | |
| D | 2424 | |
| X | 2424 | |
| i | 1200 | |
| t | 900 | 5.9% |
| e | 900 | 5.9% |
| n | 900 | 5.9% |
| a | 600 | 3.9% |
| r | 600 | 3.9% |
| / | 300 | 2.0% |
| Other values (8) | 2400 |
Sample ID_gene
Categorical
High correlation  Missing 
| Distinct | 6 |
|---|---|
| Distinct (%) | 0.3% |
| Missing | 627 |
| Missing (%) | 22.9% |
| Memory size | 21.5 KiB |
| AH9 | |
|---|---|
| AH5Q86T81 | |
| AH6T26 | |
| AH5Q89 | |
| AH8Q94 |
Length
| Max length | 9 |
|---|---|
| Median length | 6 |
| Mean length | 5.3076923 |
| Min length | 3 |
Unique
| Unique | 0 ? |
|---|---|
| Unique (%) | 0.0% |
Sample
| 1st row | AH5Q86T81 |
|---|---|
| 2nd row | AH5Q86T81 |
| 3rd row | AH5Q86T81 |
| 4th row | AH5Q86T81 |
| 5th row | AH5Q86T81 |
Common Values
| Value | Count | Frequency (%) |
| AH9 | 486 | |
| AH5Q86T81 | 324 | |
| AH6T26 | 324 | |
| AH5Q89 | 324 | |
| AH8Q94 | 324 | |
| AH8 | 324 | |
| (Missing) | 627 |
Length
Common Values (Plot)
| Value | Count | Frequency (%) |
| ah9 | 486 | |
| ah5q86t81 | 324 | |
| ah6t26 | 324 | |
| ah5q89 | 324 | |
| ah8q94 | 324 | |
| ah8 | 324 |
Most occurring characters
| Value | Count | Frequency (%) |
| A | 2106 | |
| H | 2106 | |
| 8 | 1620 | |
| 9 | 1134 | |
| Q | 972 | |
| 6 | 972 | |
| 5 | 648 | 5.8% |
| T | 648 | 5.8% |
| 1 | 324 | 2.9% |
| 2 | 324 | 2.9% |
Most occurring categories
| Value | Count | Frequency (%) |
| (unknown) | 11178 |
Most frequent character per category
(unknown)
| Value | Count | Frequency (%) |
| A | 2106 | |
| H | 2106 | |
| 8 | 1620 | |
| 9 | 1134 | |
| Q | 972 | |
| 6 | 972 | |
| 5 | 648 | 5.8% |
| T | 648 | 5.8% |
| 1 | 324 | 2.9% |
| 2 | 324 | 2.9% |
Most occurring scripts
| Value | Count | Frequency (%) |
| (unknown) | 11178 |
Most frequent character per script
(unknown)
| Value | Count | Frequency (%) |
| A | 2106 | |
| H | 2106 | |
| 8 | 1620 | |
| 9 | 1134 | |
| Q | 972 | |
| 6 | 972 | |
| 5 | 648 | 5.8% |
| T | 648 | 5.8% |
| 1 | 324 | 2.9% |
| 2 | 324 | 2.9% |
Most occurring blocks
| Value | Count | Frequency (%) |
| (unknown) | 11178 |
Most frequent character per block
(unknown)
| Value | Count | Frequency (%) |
| A | 2106 | |
| H | 2106 | |
| 8 | 1620 | |
| 9 | 1134 | |
| Q | 972 | |
| 6 | 972 | |
| 5 | 648 | 5.8% |
| T | 648 | 5.8% |
| 1 | 324 | 2.9% |
| 2 | 324 | 2.9% |
HugoSymbol_gene
Categorical
High correlation  Imbalance  Missing 
| Distinct | 2 |
|---|---|
| Distinct (%) | 0.1% |
| Missing | 627 |
| Missing (%) | 22.9% |
| Memory size | 21.5 KiB |
| KIT | |
|---|---|
| KMT2C | 162 |
Length
| Max length | 5 |
|---|---|
| Median length | 3 |
| Mean length | 3.1538462 |
| Min length | 3 |
Unique
| Unique | 0 ? |
|---|---|
| Unique (%) | 0.0% |
Sample
| 1st row | KIT |
|---|---|
| 2nd row | KIT |
| 3rd row | KIT |
| 4th row | KIT |
| 5th row | KIT |
Common Values
| Value | Count | Frequency (%) |
| KIT | 1944 | |
| KMT2C | 162 | 5.9% |
| (Missing) | 627 | 22.9% |
Length
Common Values (Plot)
| Value | Count | Frequency (%) |
| kit | 1944 | |
| kmt2c | 162 | 7.7% |
Most occurring characters
| Value | Count | Frequency (%) |
| K | 2106 | |
| T | 2106 | |
| I | 1944 | |
| M | 162 | 2.4% |
| 2 | 162 | 2.4% |
| C | 162 | 2.4% |
Most occurring categories
| Value | Count | Frequency (%) |
| (unknown) | 6642 |
Most frequent character per category
(unknown)
| Value | Count | Frequency (%) |
| K | 2106 | |
| T | 2106 | |
| I | 1944 | |
| M | 162 | 2.4% |
| 2 | 162 | 2.4% |
| C | 162 | 2.4% |
Most occurring scripts
| Value | Count | Frequency (%) |
| (unknown) | 6642 |
Most frequent character per script
(unknown)
| Value | Count | Frequency (%) |
| K | 2106 | |
| T | 2106 | |
| I | 1944 | |
| M | 162 | 2.4% |
| 2 | 162 | 2.4% |
| C | 162 | 2.4% |
Most occurring blocks
| Value | Count | Frequency (%) |
| (unknown) | 6642 |
Most frequent character per block
(unknown)
| Value | Count | Frequency (%) |
| K | 2106 | |
| T | 2106 | |
| I | 1944 | |
| M | 162 | 2.4% |
| 2 | 162 | 2.4% |
| C | 162 | 2.4% |
Chr_gene
Categorical
High correlation  Imbalance  Missing 
| Distinct | 2 |
|---|---|
| Distinct (%) | 0.1% |
| Missing | 627 |
| Missing (%) | 22.9% |
| Memory size | 21.5 KiB |
| chr4 | |
|---|---|
| chr7 | 162 |
Length
| Max length | 4 |
|---|---|
| Median length | 4 |
| Mean length | 4 |
| Min length | 4 |
Unique
| Unique | 0 ? |
|---|---|
| Unique (%) | 0.0% |
Sample
| 1st row | chr4 |
|---|---|
| 2nd row | chr4 |
| 3rd row | chr4 |
| 4th row | chr4 |
| 5th row | chr4 |
Common Values
| Value | Count | Frequency (%) |
| chr4 | 1944 | |
| chr7 | 162 | 5.9% |
| (Missing) | 627 | 22.9% |
Length
Common Values (Plot)
| Value | Count | Frequency (%) |
| chr4 | 1944 | |
| chr7 | 162 | 7.7% |
Most occurring characters
| Value | Count | Frequency (%) |
| c | 2106 | |
| h | 2106 | |
| r | 2106 | |
| 4 | 1944 | |
| 7 | 162 | 1.9% |
Most occurring categories
| Value | Count | Frequency (%) |
| (unknown) | 8424 |
Most frequent character per category
(unknown)
| Value | Count | Frequency (%) |
| c | 2106 | |
| h | 2106 | |
| r | 2106 | |
| 4 | 1944 | |
| 7 | 162 | 1.9% |
Most occurring scripts
| Value | Count | Frequency (%) |
| (unknown) | 8424 |
Most frequent character per script
(unknown)
| Value | Count | Frequency (%) |
| c | 2106 | |
| h | 2106 | |
| r | 2106 | |
| 4 | 1944 | |
| 7 | 162 | 1.9% |
Most occurring blocks
| Value | Count | Frequency (%) |
| (unknown) | 8424 |
Most frequent character per block
(unknown)
| Value | Count | Frequency (%) |
| c | 2106 | |
| h | 2106 | |
| r | 2106 | |
| 4 | 1944 | |
| 7 | 162 | 1.9% |
Chr End_gene
Categorical
High correlation  Missing 
| Distinct | 3 |
|---|---|
| Distinct (%) | 0.1% |
| Missing | 627 |
| Missing (%) | 22.9% |
| Memory size | 21.5 KiB |
| 55593654.0 | |
|---|---|
| 55599332.0 | |
| 151882672.0 |
Length
| Max length | 11 |
|---|---|
| Median length | 10 |
| Mean length | 10.076923 |
| Min length | 10 |
Unique
| Unique | 0 ? |
|---|---|
| Unique (%) | 0.0% |
Sample
| 1st row | 55593654.0 |
|---|---|
| 2nd row | 55593654.0 |
| 3rd row | 55593654.0 |
| 4th row | 55593654.0 |
| 5th row | 55593654.0 |
Common Values
| Value | Count | Frequency (%) |
| 55593654.0 | 972 | |
| 55599332.0 | 972 | |
| 151882672.0 | 162 | 5.9% |
| (Missing) | 627 |
Length
Common Values (Plot)
| Value | Count | Frequency (%) |
| 55593654.0 | 972 | |
| 55599332.0 | 972 | |
| 151882672.0 | 162 | 7.7% |
Most occurring characters
| Value | Count | Frequency (%) |
| 5 | 6966 | |
| 9 | 2916 | |
| 3 | 2916 | |
| 0 | 2106 | 9.9% |
| . | 2106 | 9.9% |
| 2 | 1296 | 6.1% |
| 6 | 1134 | 5.3% |
| 4 | 972 | 4.6% |
| 1 | 324 | 1.5% |
| 8 | 324 | 1.5% |
Most occurring categories
| Value | Count | Frequency (%) |
| (unknown) | 21222 |
Most frequent character per category
(unknown)
| Value | Count | Frequency (%) |
| 5 | 6966 | |
| 9 | 2916 | |
| 3 | 2916 | |
| 0 | 2106 | 9.9% |
| . | 2106 | 9.9% |
| 2 | 1296 | 6.1% |
| 6 | 1134 | 5.3% |
| 4 | 972 | 4.6% |
| 1 | 324 | 1.5% |
| 8 | 324 | 1.5% |
Most occurring scripts
| Value | Count | Frequency (%) |
| (unknown) | 21222 |
Most frequent character per script
(unknown)
| Value | Count | Frequency (%) |
| 5 | 6966 | |
| 9 | 2916 | |
| 3 | 2916 | |
| 0 | 2106 | 9.9% |
| . | 2106 | 9.9% |
| 2 | 1296 | 6.1% |
| 6 | 1134 | 5.3% |
| 4 | 972 | 4.6% |
| 1 | 324 | 1.5% |
| 8 | 324 | 1.5% |
Most occurring blocks
| Value | Count | Frequency (%) |
| (unknown) | 21222 |
Most frequent character per block
(unknown)
| Value | Count | Frequency (%) |
| 5 | 6966 | |
| 9 | 2916 | |
| 3 | 2916 | |
| 0 | 2106 | 9.9% |
| . | 2106 | 9.9% |
| 2 | 1296 | 6.1% |
| 6 | 1134 | 5.3% |
| 4 | 972 | 4.6% |
| 1 | 324 | 1.5% |
| 8 | 324 | 1.5% |
Chr Start_gene
Categorical
High correlation  Missing 
| Distinct | 3 |
|---|---|
| Distinct (%) | 0.1% |
| Missing | 627 |
| Missing (%) | 22.9% |
| Memory size | 21.5 KiB |
| 55593601.0 | |
|---|---|
| 55599332.0 | |
| 151882672.0 |
Length
| Max length | 11 |
|---|---|
| Median length | 10 |
| Mean length | 10.076923 |
| Min length | 10 |
Unique
| Unique | 0 ? |
|---|---|
| Unique (%) | 0.0% |
Sample
| 1st row | 55593601.0 |
|---|---|
| 2nd row | 55593601.0 |
| 3rd row | 55593601.0 |
| 4th row | 55593601.0 |
| 5th row | 55593601.0 |
Common Values
| Value | Count | Frequency (%) |
| 55593601.0 | 972 | |
| 55599332.0 | 972 | |
| 151882672.0 | 162 | 5.9% |
| (Missing) | 627 |
Length
Common Values (Plot)
| Value | Count | Frequency (%) |
| 55593601.0 | 972 | |
| 55599332.0 | 972 | |
| 151882672.0 | 162 | 7.7% |
Most occurring characters
| Value | Count | Frequency (%) |
| 5 | 5994 | |
| 0 | 3078 | |
| 9 | 2916 | |
| 3 | 2916 | |
| . | 2106 | 9.9% |
| 1 | 1296 | 6.1% |
| 2 | 1296 | 6.1% |
| 6 | 1134 | 5.3% |
| 8 | 324 | 1.5% |
| 7 | 162 | 0.8% |
Most occurring categories
| Value | Count | Frequency (%) |
| (unknown) | 21222 |
Most frequent character per category
(unknown)
| Value | Count | Frequency (%) |
| 5 | 5994 | |
| 0 | 3078 | |
| 9 | 2916 | |
| 3 | 2916 | |
| . | 2106 | 9.9% |
| 1 | 1296 | 6.1% |
| 2 | 1296 | 6.1% |
| 6 | 1134 | 5.3% |
| 8 | 324 | 1.5% |
| 7 | 162 | 0.8% |
Most occurring scripts
| Value | Count | Frequency (%) |
| (unknown) | 21222 |
Most frequent character per script
(unknown)
| Value | Count | Frequency (%) |
| 5 | 5994 | |
| 0 | 3078 | |
| 9 | 2916 | |
| 3 | 2916 | |
| . | 2106 | 9.9% |
| 1 | 1296 | 6.1% |
| 2 | 1296 | 6.1% |
| 6 | 1134 | 5.3% |
| 8 | 324 | 1.5% |
| 7 | 162 | 0.8% |
Most occurring blocks
| Value | Count | Frequency (%) |
| (unknown) | 21222 |
Most frequent character per block
(unknown)
| Value | Count | Frequency (%) |
| 5 | 5994 | |
| 0 | 3078 | |
| 9 | 2916 | |
| 3 | 2916 | |
| . | 2106 | 9.9% |
| 1 | 1296 | 6.1% |
| 2 | 1296 | 6.1% |
| 6 | 1134 | 5.3% |
| 8 | 324 | 1.5% |
| 7 | 162 | 0.8% |
HGVS ProteinChange_gene
Categorical
High correlation  Missing 
| Distinct | 3 |
|---|---|
| Distinct (%) | 0.1% |
| Missing | 627 |
| Missing (%) | 22.9% |
| Memory size | 21.5 KiB |
| p.Q556_T574delinsP | |
|---|---|
| p.D820Y | |
| p.A1685S |
Length
| Max length | 18 |
|---|---|
| Median length | 8 |
| Mean length | 12.153846 |
| Min length | 7 |
Unique
| Unique | 0 ? |
|---|---|
| Unique (%) | 0.0% |
Sample
| 1st row | p.Q556_T574delinsP |
|---|---|
| 2nd row | p.Q556_T574delinsP |
| 3rd row | p.Q556_T574delinsP |
| 4th row | p.Q556_T574delinsP |
| 5th row | p.Q556_T574delinsP |
Common Values
| Value | Count | Frequency (%) |
| p.Q556_T574delinsP | 972 | |
| p.D820Y | 972 | |
| p.A1685S | 162 | 5.9% |
| (Missing) | 627 |
Length
Common Values (Plot)
| Value | Count | Frequency (%) |
| p.q556_t574delinsp | 972 | |
| p.d820y | 972 | |
| p.a1685s | 162 | 7.7% |
Most occurring characters
| Value | Count | Frequency (%) |
| 5 | 3078 | 12.0% |
| p | 2106 | 8.2% |
| . | 2106 | 8.2% |
| 6 | 1134 | 4.4% |
| 8 | 1134 | 4.4% |
| Q | 972 | 3.8% |
| T | 972 | 3.8% |
| _ | 972 | 3.8% |
| 7 | 972 | 3.8% |
| 4 | 972 | 3.8% |
| Other values (14) | 11178 |
Most occurring categories
| Value | Count | Frequency (%) |
| (unknown) | 25596 |
Most frequent character per category
(unknown)
| Value | Count | Frequency (%) |
| 5 | 3078 | 12.0% |
| p | 2106 | 8.2% |
| . | 2106 | 8.2% |
| 6 | 1134 | 4.4% |
| 8 | 1134 | 4.4% |
| Q | 972 | 3.8% |
| T | 972 | 3.8% |
| _ | 972 | 3.8% |
| 7 | 972 | 3.8% |
| 4 | 972 | 3.8% |
| Other values (14) | 11178 |
Most occurring scripts
| Value | Count | Frequency (%) |
| (unknown) | 25596 |
Most frequent character per script
(unknown)
| Value | Count | Frequency (%) |
| 5 | 3078 | 12.0% |
| p | 2106 | 8.2% |
| . | 2106 | 8.2% |
| 6 | 1134 | 4.4% |
| 8 | 1134 | 4.4% |
| Q | 972 | 3.8% |
| T | 972 | 3.8% |
| _ | 972 | 3.8% |
| 7 | 972 | 3.8% |
| 4 | 972 | 3.8% |
| Other values (14) | 11178 |
Most occurring blocks
| Value | Count | Frequency (%) |
| (unknown) | 25596 |
Most frequent character per block
(unknown)
| Value | Count | Frequency (%) |
| 5 | 3078 | 12.0% |
| p | 2106 | 8.2% |
| . | 2106 | 8.2% |
| 6 | 1134 | 4.4% |
| 8 | 1134 | 4.4% |
| Q | 972 | 3.8% |
| T | 972 | 3.8% |
| _ | 972 | 3.8% |
| 7 | 972 | 3.8% |
| 4 | 972 | 3.8% |
| Other values (14) | 11178 |
HGVS cDNAChange_gene
Categorical
High correlation  Missing 
| Distinct | 3 |
|---|---|
| Distinct (%) | 0.1% |
| Missing | 627 |
| Missing (%) | 22.9% |
| Memory size | 21.5 KiB |
| c.1667_1720del | |
|---|---|
| c.2458G>T | |
| c.5053G>T |
Length
| Max length | 14 |
|---|---|
| Median length | 9 |
| Mean length | 11.307692 |
| Min length | 9 |
Unique
| Unique | 0 ? |
|---|---|
| Unique (%) | 0.0% |
Sample
| 1st row | c.1667_1720del |
|---|---|
| 2nd row | c.1667_1720del |
| 3rd row | c.1667_1720del |
| 4th row | c.1667_1720del |
| 5th row | c.1667_1720del |
Common Values
| Value | Count | Frequency (%) |
| c.1667_1720del | 972 | |
| c.2458G>T | 972 | |
| c.5053G>T | 162 | 5.9% |
| (Missing) | 627 |
Length
Common Values (Plot)
| Value | Count | Frequency (%) |
| c.1667_1720del | 972 | |
| c.2458g>t | 972 | |
| c.5053g>t | 162 | 7.7% |
Most occurring characters
| Value | Count | Frequency (%) |
| c | 2106 | 8.8% |
| . | 2106 | 8.8% |
| 1 | 1944 | 8.2% |
| 6 | 1944 | 8.2% |
| 7 | 1944 | 8.2% |
| 2 | 1944 | 8.2% |
| 5 | 1296 | 5.4% |
| 0 | 1134 | 4.8% |
| T | 1134 | 4.8% |
| > | 1134 | 4.8% |
| Other values (8) | 7128 |
Most occurring categories
| Value | Count | Frequency (%) |
| (unknown) | 23814 |
Most frequent character per category
(unknown)
| Value | Count | Frequency (%) |
| c | 2106 | 8.8% |
| . | 2106 | 8.8% |
| 1 | 1944 | 8.2% |
| 6 | 1944 | 8.2% |
| 7 | 1944 | 8.2% |
| 2 | 1944 | 8.2% |
| 5 | 1296 | 5.4% |
| 0 | 1134 | 4.8% |
| T | 1134 | 4.8% |
| > | 1134 | 4.8% |
| Other values (8) | 7128 |
Most occurring scripts
| Value | Count | Frequency (%) |
| (unknown) | 23814 |
Most frequent character per script
(unknown)
| Value | Count | Frequency (%) |
| c | 2106 | 8.8% |
| . | 2106 | 8.8% |
| 1 | 1944 | 8.2% |
| 6 | 1944 | 8.2% |
| 7 | 1944 | 8.2% |
| 2 | 1944 | 8.2% |
| 5 | 1296 | 5.4% |
| 0 | 1134 | 4.8% |
| T | 1134 | 4.8% |
| > | 1134 | 4.8% |
| Other values (8) | 7128 |
Most occurring blocks
| Value | Count | Frequency (%) |
| (unknown) | 23814 |
Most frequent character per block
(unknown)
| Value | Count | Frequency (%) |
| c | 2106 | 8.8% |
| . | 2106 | 8.8% |
| 1 | 1944 | 8.2% |
| 6 | 1944 | 8.2% |
| 7 | 1944 | 8.2% |
| 2 | 1944 | 8.2% |
| 5 | 1296 | 5.4% |
| 0 | 1134 | 4.8% |
| T | 1134 | 4.8% |
| > | 1134 | 4.8% |
| Other values (8) | 7128 |
Total Reads_gene
Real number (ℝ)
High correlation  Missing 
| Distinct | 12 |
|---|---|
| Distinct (%) | 0.6% |
| Missing | 627 |
| Missing (%) | 22.9% |
| Infinite | 0 |
| Infinite (%) | 0.0% |
| Mean | 459.30769 |
| Minimum | 45 |
|---|---|
| Maximum | 565 |
| Zeros | 0 |
| Zeros (%) | 0.0% |
| Negative | 0 |
| Negative (%) | 0.0% |
| Memory size | 21.5 KiB |
Quantile statistics
| Minimum | 45 |
|---|---|
| 5-th percentile | 45 |
| Q1 | 458 |
| median | 490 |
| Q3 | 501 |
| 95-th percentile | 565 |
| Maximum | 565 |
| Range | 520 |
| Interquartile range (IQR) | 43 |
Descriptive statistics
| Standard deviation | 124.48801 |
|---|---|
| Coefficient of variation (CV) | 0.27103401 |
| Kurtosis | 6.5267054 |
| Mean | 459.30769 |
| Median Absolute Deviation (MAD) | 32 |
| Skewness | -2.75089 |
| Sum | 967302 |
| Variance | 15497.264 |
| Monotonicity | Not monotonic |
| Value | Count | Frequency (%) |
| 501 | 324 | |
| 487 | 162 | 5.9% |
| 458 | 162 | 5.9% |
| 441 | 162 | 5.9% |
| 500 | 162 | 5.9% |
| 565 | 162 | 5.9% |
| 540 | 162 | 5.9% |
| 490 | 162 | 5.9% |
| 523 | 162 | 5.9% |
| 480 | 162 | 5.9% |
| Other values (2) | 324 | |
| (Missing) | 627 |
| Value | Count | Frequency (%) |
| 45 | 162 | |
| 440 | 162 | |
| 441 | 162 | |
| 458 | 162 | |
| 480 | 162 | |
| 487 | 162 | |
| 490 | 162 | |
| 500 | 162 | |
| 501 | 324 | |
| 523 | 162 |
| Value | Count | Frequency (%) |
| 565 | 162 | |
| 540 | 162 | |
| 523 | 162 | |
| 501 | 324 | |
| 500 | 162 | |
| 490 | 162 | |
| 487 | 162 | |
| 480 | 162 | |
| 458 | 162 | |
| 441 | 162 |
Variant AlleleFrequency_gene
Real number (ℝ)
High correlation  Missing 
| Distinct | 13 |
|---|---|
| Distinct (%) | 0.6% |
| Missing | 627 |
| Missing (%) | 22.9% |
| Infinite | 0 |
| Infinite (%) | 0.0% |
| Mean | 0.38618462 |
| Minimum | 0.1778 |
|---|---|
| Maximum | 0.53 |
| Zeros | 0 |
| Zeros (%) | 0.0% |
| Negative | 0 |
| Negative (%) | 0.0% |
| Memory size | 21.5 KiB |
Quantile statistics
| Minimum | 0.1778 |
|---|---|
| 5-th percentile | 0.1778 |
| Q1 | 0.2991 |
| median | 0.3204 |
| Q3 | 0.5087 |
| 95-th percentile | 0.53 |
| Maximum | 0.53 |
| Range | 0.3522 |
| Interquartile range (IQR) | 0.2096 |
Descriptive statistics
| Standard deviation | 0.11938254 |
|---|---|
| Coefficient of variation (CV) | 0.30913333 |
| Kurtosis | -1.5065269 |
| Mean | 0.38618462 |
| Median Absolute Deviation (MAD) | 0.1426 |
| Skewness | -0.076833756 |
| Sum | 813.3048 |
| Variance | 0.01425219 |
| Monotonicity | Not monotonic |
| Value | Count | Frequency (%) |
| 0.2813 | 162 | 5.9% |
| 0.3039 | 162 | 5.9% |
| 0.5087 | 162 | 5.9% |
| 0.3174 | 162 | 5.9% |
| 0.521 | 162 | 5.9% |
| 0.53 | 162 | 5.9% |
| 0.2991 | 162 | 5.9% |
| 0.3204 | 162 | 5.9% |
| 0.4918 | 162 | 5.9% |
| 0.5296 | 162 | 5.9% |
| Other values (3) | 486 | |
| (Missing) | 627 |
| Value | Count | Frequency (%) |
| 0.1778 | 162 | |
| 0.2667 | 162 | |
| 0.2813 | 162 | |
| 0.2991 | 162 | |
| 0.3039 | 162 | |
| 0.3174 | 162 | |
| 0.3204 | 162 | |
| 0.4727 | 162 | |
| 0.4918 | 162 | |
| 0.5087 | 162 |
| Value | Count | Frequency (%) |
| 0.53 | 162 | |
| 0.5296 | 162 | |
| 0.521 | 162 | |
| 0.5087 | 162 | |
| 0.4918 | 162 | |
| 0.4727 | 162 | |
| 0.3204 | 162 | |
| 0.3174 | 162 | |
| 0.3039 | 162 | |
| 0.2991 | 162 |
VariantClass_gene
Categorical
High correlation  Missing 
| Distinct | 2 |
|---|---|
| Distinct (%) | 0.1% |
| Missing | 627 |
| Missing (%) | 22.9% |
| Memory size | 21.5 KiB |
| Missense_Mutation | |
|---|---|
| In_Frame_Del |
Length
| Max length | 17 |
|---|---|
| Median length | 17 |
| Mean length | 14.692308 |
| Min length | 12 |
Unique
| Unique | 0 ? |
|---|---|
| Unique (%) | 0.0% |
Sample
| 1st row | In_Frame_Del |
|---|---|
| 2nd row | In_Frame_Del |
| 3rd row | In_Frame_Del |
| 4th row | In_Frame_Del |
| 5th row | In_Frame_Del |
Common Values
| Value | Count | Frequency (%) |
| Missense_Mutation | 1134 | |
| In_Frame_Del | 972 | |
| (Missing) | 627 |
Length
Common Values (Plot)
| Value | Count | Frequency (%) |
| missense_mutation | 1134 | |
| in_frame_del | 972 |
Most occurring characters
| Value | Count | Frequency (%) |
| e | 4212 | |
| s | 3402 | |
| n | 3240 | |
| _ | 3078 | |
| M | 2268 | 7.3% |
| i | 2268 | 7.3% |
| t | 2268 | 7.3% |
| a | 2106 | 6.8% |
| u | 1134 | 3.7% |
| o | 1134 | 3.7% |
| Other values (6) | 5832 |
Most occurring categories
| Value | Count | Frequency (%) |
| (unknown) | 30942 |
Most frequent character per category
(unknown)
| Value | Count | Frequency (%) |
| e | 4212 | |
| s | 3402 | |
| n | 3240 | |
| _ | 3078 | |
| M | 2268 | 7.3% |
| i | 2268 | 7.3% |
| t | 2268 | 7.3% |
| a | 2106 | 6.8% |
| u | 1134 | 3.7% |
| o | 1134 | 3.7% |
| Other values (6) | 5832 |
Most occurring scripts
| Value | Count | Frequency (%) |
| (unknown) | 30942 |
Most frequent character per script
(unknown)
| Value | Count | Frequency (%) |
| e | 4212 | |
| s | 3402 | |
| n | 3240 | |
| _ | 3078 | |
| M | 2268 | 7.3% |
| i | 2268 | 7.3% |
| t | 2268 | 7.3% |
| a | 2106 | 6.8% |
| u | 1134 | 3.7% |
| o | 1134 | 3.7% |
| Other values (6) | 5832 |
Most occurring blocks
| Value | Count | Frequency (%) |
| (unknown) | 30942 |
Most frequent character per block
(unknown)
| Value | Count | Frequency (%) |
| e | 4212 | |
| s | 3402 | |
| n | 3240 | |
| _ | 3078 | |
| M | 2268 | 7.3% |
| i | 2268 | 7.3% |
| t | 2268 | 7.3% |
| a | 2106 | 6.8% |
| u | 1134 | 3.7% |
| o | 1134 | 3.7% |
| Other values (6) | 5832 |
MutationEffect_gene
Categorical
High correlation  Missing 
| Distinct | 3 |
|---|---|
| Distinct (%) | 0.1% |
| Missing | 627 |
| Missing (%) | 22.9% |
| Memory size | 21.5 KiB |
| Gain-of-function | |
|---|---|
| Inconclusive | |
| Loss-of-function |
Length
| Max length | 16 |
|---|---|
| Median length | 16 |
| Mean length | 14.153846 |
| Min length | 12 |
Unique
| Unique | 0 ? |
|---|---|
| Unique (%) | 0.0% |
Sample
| 1st row | Gain-of-function |
|---|---|
| 2nd row | Gain-of-function |
| 3rd row | Gain-of-function |
| 4th row | Gain-of-function |
| 5th row | Gain-of-function |
Common Values
| Value | Count | Frequency (%) |
| Gain-of-function | 972 | |
| Inconclusive | 972 | |
| Loss-of-function | 162 | 5.9% |
| (Missing) | 627 |
Length
Common Values (Plot)
| Value | Count | Frequency (%) |
| gain-of-function | 972 | |
| inconclusive | 972 | |
| loss-of-function | 162 | 7.7% |
Most occurring characters
| Value | Count | Frequency (%) |
| n | 5184 | |
| o | 3402 | |
| i | 3078 | |
| c | 3078 | |
| f | 2268 | |
| - | 2268 | |
| u | 2106 | |
| s | 1296 | 4.3% |
| t | 1134 | 3.8% |
| G | 972 | 3.3% |
| Other values (6) | 5022 |
Most occurring categories
| Value | Count | Frequency (%) |
| (unknown) | 29808 |
Most frequent character per category
(unknown)
| Value | Count | Frequency (%) |
| n | 5184 | |
| o | 3402 | |
| i | 3078 | |
| c | 3078 | |
| f | 2268 | |
| - | 2268 | |
| u | 2106 | |
| s | 1296 | 4.3% |
| t | 1134 | 3.8% |
| G | 972 | 3.3% |
| Other values (6) | 5022 |
Most occurring scripts
| Value | Count | Frequency (%) |
| (unknown) | 29808 |
Most frequent character per script
(unknown)
| Value | Count | Frequency (%) |
| n | 5184 | |
| o | 3402 | |
| i | 3078 | |
| c | 3078 | |
| f | 2268 | |
| - | 2268 | |
| u | 2106 | |
| s | 1296 | 4.3% |
| t | 1134 | 3.8% |
| G | 972 | 3.3% |
| Other values (6) | 5022 |
Most occurring blocks
| Value | Count | Frequency (%) |
| (unknown) | 29808 |
Most frequent character per block
(unknown)
| Value | Count | Frequency (%) |
| n | 5184 | |
| o | 3402 | |
| i | 3078 | |
| c | 3078 | |
| f | 2268 | |
| - | 2268 | |
| u | 2106 | |
| s | 1296 | 4.3% |
| t | 1134 | 3.8% |
| G | 972 | 3.3% |
| Other values (6) | 5022 |
Oncogenicity_gene
Categorical
High correlation  Missing 
| Distinct | 3 |
|---|---|
| Distinct (%) | 0.1% |
| Missing | 627 |
| Missing (%) | 22.9% |
| Memory size | 21.5 KiB |
| Oncogenic | |
|---|---|
| Resistance | |
| Likely Oncogenic |
Length
| Max length | 16 |
|---|---|
| Median length | 10 |
| Mean length | 10 |
| Min length | 9 |
Unique
| Unique | 0 ? |
|---|---|
| Unique (%) | 0.0% |
Sample
| 1st row | Oncogenic |
|---|---|
| 2nd row | Oncogenic |
| 3rd row | Oncogenic |
| 4th row | Oncogenic |
| 5th row | Oncogenic |
Common Values
| Value | Count | Frequency (%) |
| Oncogenic | 972 | |
| Resistance | 972 | |
| Likely Oncogenic | 162 | 5.9% |
| (Missing) | 627 |
Length
Common Values (Plot)
| Value | Count | Frequency (%) |
| oncogenic | 1134 | |
| resistance | 972 | |
| likely | 162 | 7.1% |
Most occurring characters
| Value | Count | Frequency (%) |
| n | 3240 | |
| c | 3240 | |
| e | 3240 | |
| i | 2268 | |
| s | 1944 | |
| o | 1134 | 5.4% |
| g | 1134 | 5.4% |
| O | 1134 | 5.4% |
| R | 972 | 4.6% |
| t | 972 | 4.6% |
| Other values (6) | 1782 |
Most occurring categories
| Value | Count | Frequency (%) |
| (unknown) | 21060 |
Most frequent character per category
(unknown)
| Value | Count | Frequency (%) |
| n | 3240 | |
| c | 3240 | |
| e | 3240 | |
| i | 2268 | |
| s | 1944 | |
| o | 1134 | 5.4% |
| g | 1134 | 5.4% |
| O | 1134 | 5.4% |
| R | 972 | 4.6% |
| t | 972 | 4.6% |
| Other values (6) | 1782 |
Most occurring scripts
| Value | Count | Frequency (%) |
| (unknown) | 21060 |
Most frequent character per script
(unknown)
| Value | Count | Frequency (%) |
| n | 3240 | |
| c | 3240 | |
| e | 3240 | |
| i | 2268 | |
| s | 1944 | |
| o | 1134 | 5.4% |
| g | 1134 | 5.4% |
| O | 1134 | 5.4% |
| R | 972 | 4.6% |
| t | 972 | 4.6% |
| Other values (6) | 1782 |
Most occurring blocks
| Value | Count | Frequency (%) |
| (unknown) | 21060 |
Most frequent character per block
(unknown)
| Value | Count | Frequency (%) |
| n | 3240 | |
| c | 3240 | |
| e | 3240 | |
| i | 2268 | |
| s | 1944 | |
| o | 1134 | 5.4% |
| g | 1134 | 5.4% |
| O | 1134 | 5.4% |
| R | 972 | 4.6% |
| t | 972 | 4.6% |
| Other values (6) | 1782 |
Existing Variant_gene
Categorical
High correlation  Missing 
| Distinct | 2 |
|---|---|
| Distinct (%) | 0.2% |
| Missing | 1599 |
| Missing (%) | 58.5% |
| Memory size | 21.5 KiB |
| CM023092,KinMutBase_KIT_DNA:g.76151G>T,COSM12710,COSM17947,COSM22379 | |
|---|---|
| rs145848316,COSM249560,COSM249561 |
Length
| Max length | 68 |
|---|---|
| Median length | 68 |
| Mean length | 63 |
| Min length | 33 |
Unique
| Unique | 0 ? |
|---|---|
| Unique (%) | 0.0% |
Sample
| 1st row | CM023092,KinMutBase_KIT_DNA:g.76151G>T,COSM12710,COSM17947,COSM22379 |
|---|---|
| 2nd row | CM023092,KinMutBase_KIT_DNA:g.76151G>T,COSM12710,COSM17947,COSM22379 |
| 3rd row | CM023092,KinMutBase_KIT_DNA:g.76151G>T,COSM12710,COSM17947,COSM22379 |
| 4th row | CM023092,KinMutBase_KIT_DNA:g.76151G>T,COSM12710,COSM17947,COSM22379 |
| 5th row | CM023092,KinMutBase_KIT_DNA:g.76151G>T,COSM12710,COSM17947,COSM22379 |
Common Values
| Value | Count | Frequency (%) |
| CM023092,KinMutBase_KIT_DNA:g.76151G>T,COSM12710,COSM17947,COSM22379 | 972 | |
| rs145848316,COSM249560,COSM249561 | 162 | 5.9% |
| (Missing) | 1599 |
Length
Common Values (Plot)
| Value | Count | Frequency (%) |
| cm023092,kinmutbase_kit_dna:g.76151g>t,cosm12710,cosm17947,cosm22379 | 972 | |
| rs145848316,cosm249560,cosm249561 | 162 | 14.3% |
Most occurring characters
| Value | Count | Frequency (%) |
| 1 | 5346 | 7.5% |
| M | 5184 | 7.3% |
| 2 | 5184 | 7.3% |
| 7 | 4860 | 6.8% |
| , | 4212 | 5.9% |
| C | 4212 | 5.9% |
| O | 3240 | 4.5% |
| 9 | 3240 | 4.5% |
| S | 3240 | 4.5% |
| 0 | 3078 | 4.3% |
| Other values (26) | 29646 |
Most occurring categories
| Value | Count | Frequency (%) |
| (unknown) | 71442 |
Most frequent character per category
(unknown)
| Value | Count | Frequency (%) |
| 1 | 5346 | 7.5% |
| M | 5184 | 7.3% |
| 2 | 5184 | 7.3% |
| 7 | 4860 | 6.8% |
| , | 4212 | 5.9% |
| C | 4212 | 5.9% |
| O | 3240 | 4.5% |
| 9 | 3240 | 4.5% |
| S | 3240 | 4.5% |
| 0 | 3078 | 4.3% |
| Other values (26) | 29646 |
Most occurring scripts
| Value | Count | Frequency (%) |
| (unknown) | 71442 |
Most frequent character per script
(unknown)
| Value | Count | Frequency (%) |
| 1 | 5346 | 7.5% |
| M | 5184 | 7.3% |
| 2 | 5184 | 7.3% |
| 7 | 4860 | 6.8% |
| , | 4212 | 5.9% |
| C | 4212 | 5.9% |
| O | 3240 | 4.5% |
| 9 | 3240 | 4.5% |
| S | 3240 | 4.5% |
| 0 | 3078 | 4.3% |
| Other values (26) | 29646 |
Most occurring blocks
| Value | Count | Frequency (%) |
| (unknown) | 71442 |
Most frequent character per block
(unknown)
| Value | Count | Frequency (%) |
| 1 | 5346 | 7.5% |
| M | 5184 | 7.3% |
| 2 | 5184 | 7.3% |
| 7 | 4860 | 6.8% |
| , | 4212 | 5.9% |
| C | 4212 | 5.9% |
| O | 3240 | 4.5% |
| 9 | 3240 | 4.5% |
| S | 3240 | 4.5% |
| 0 | 3078 | 4.3% |
| Other values (26) | 29646 |
DiagnosisSubtype_pathology
Categorical
High correlation  Imbalance  Missing 
| Distinct | 2 |
|---|---|
| Distinct (%) | 0.1% |
| Missing | 543 |
| Missing (%) | 19.9% |
| Memory size | 21.5 KiB |
| epithelioid type | |
|---|---|
| spindle type | 84 |
Length
| Max length | 16 |
|---|---|
| Median length | 16 |
| Mean length | 15.846575 |
| Min length | 12 |
Unique
| Unique | 0 ? |
|---|---|
| Unique (%) | 0.0% |
Sample
| 1st row | epithelioid type |
|---|---|
| 2nd row | epithelioid type |
| 3rd row | epithelioid type |
| 4th row | epithelioid type |
| 5th row | epithelioid type |
Common Values
| Value | Count | Frequency (%) |
| epithelioid type | 2106 | |
| spindle type | 84 | 3.1% |
| (Missing) | 543 | 19.9% |
Length
Common Values (Plot)
| Value | Count | Frequency (%) |
| type | 2190 | |
| epithelioid | 2106 | |
| spindle | 84 | 1.9% |
Most occurring characters
| Value | Count | Frequency (%) |
| e | 6486 | |
| i | 6402 | |
| p | 4380 | |
| t | 4296 | |
| l | 2190 | 6.3% |
| d | 2190 | 6.3% |
| y | 2190 | 6.3% |
| 2190 | 6.3% | |
| o | 2106 | 6.1% |
| h | 2106 | 6.1% |
| Other values (2) | 168 | 0.5% |
Most occurring categories
| Value | Count | Frequency (%) |
| (unknown) | 34704 |
Most frequent character per category
(unknown)
| Value | Count | Frequency (%) |
| e | 6486 | |
| i | 6402 | |
| p | 4380 | |
| t | 4296 | |
| l | 2190 | 6.3% |
| d | 2190 | 6.3% |
| y | 2190 | 6.3% |
| 2190 | 6.3% | |
| o | 2106 | 6.1% |
| h | 2106 | 6.1% |
| Other values (2) | 168 | 0.5% |
Most occurring scripts
| Value | Count | Frequency (%) |
| (unknown) | 34704 |
Most frequent character per script
(unknown)
| Value | Count | Frequency (%) |
| e | 6486 | |
| i | 6402 | |
| p | 4380 | |
| t | 4296 | |
| l | 2190 | 6.3% |
| d | 2190 | 6.3% |
| y | 2190 | 6.3% |
| 2190 | 6.3% | |
| o | 2106 | 6.1% |
| h | 2106 | 6.1% |
| Other values (2) | 168 | 0.5% |
Most occurring blocks
| Value | Count | Frequency (%) |
| (unknown) | 34704 |
Most frequent character per block
(unknown)
| Value | Count | Frequency (%) |
| e | 6486 | |
| i | 6402 | |
| p | 4380 | |
| t | 4296 | |
| l | 2190 | 6.3% |
| d | 2190 | 6.3% |
| y | 2190 | 6.3% |
| 2190 | 6.3% | |
| o | 2106 | 6.1% |
| h | 2106 | 6.1% |
| Other values (2) | 168 | 0.5% |
Sample ID_pathology
Categorical
High correlation 
| Distinct | 44 |
|---|---|
| Distinct (%) | 1.6% |
| Missing | 9 |
| Missing (%) | 0.3% |
| Memory size | 21.5 KiB |
| AH5 | |
|---|---|
| AH5Q86T81 | |
| AH5Q89 | |
| AH6T26 | |
| AH6T28 | |
| Other values (39) |
Length
| Max length | 19 |
|---|---|
| Median length | 16 |
| Mean length | 6.2422907 |
| Min length | 3 |
Unique
| Unique | 0 ? |
|---|---|
| Unique (%) | 0.0% |
Sample
| 1st row | AH5 |
|---|---|
| 2nd row | AH5Q86T81 |
| 3rd row | AH5Q89 |
| 4th row | AH6T26 |
| 5th row | AH6T28 |
Common Values
| Value | Count | Frequency (%) |
| AH5 | 234 | |
| AH5Q86T81 | 234 | |
| AH5Q89 | 234 | |
| AH6T26 | 234 | |
| AH6T28 | 234 | |
| AH8 | 234 | |
| AH8Q94 | 234 | |
| AH9 | 234 | |
| Originator | 234 | |
| ORIGINATOR | 54 | 2.0% |
| Other values (34) | 564 |
Length
| Value | Count | Frequency (%) |
| originator | 288 | |
| ah5q86t81 | 234 | |
| ah5 | 234 | |
| ah5q89 | 234 | |
| ah6t26 | 234 | |
| ah8 | 234 | |
| ah6t28 | 234 | |
| ah8q94 | 234 | |
| ah9 | 234 | |
| vqf | 20 | 0.7% |
| Other values (33) | 544 |
Most occurring characters
| Value | Count | Frequency (%) |
| H | 2072 | 12.2% |
| A | 1976 | 11.6% |
| 8 | 1572 | 9.2% |
| 6 | 1114 | 6.6% |
| Q | 1030 | 6.1% |
| T | 836 | 4.9% |
| 5 | 786 | 4.6% |
| 9 | 754 | 4.4% |
| O | 522 | 3.1% |
| 2 | 504 | 3.0% |
| Other values (31) | 5838 |
Most occurring categories
| Value | Count | Frequency (%) |
| (unknown) | 17004 |
Most frequent character per category
(unknown)
| Value | Count | Frequency (%) |
| H | 2072 | 12.2% |
| A | 1976 | 11.6% |
| 8 | 1572 | 9.2% |
| 6 | 1114 | 6.6% |
| Q | 1030 | 6.1% |
| T | 836 | 4.9% |
| 5 | 786 | 4.6% |
| 9 | 754 | 4.4% |
| O | 522 | 3.1% |
| 2 | 504 | 3.0% |
| Other values (31) | 5838 |
Most occurring scripts
| Value | Count | Frequency (%) |
| (unknown) | 17004 |
Most frequent character per script
(unknown)
| Value | Count | Frequency (%) |
| H | 2072 | 12.2% |
| A | 1976 | 11.6% |
| 8 | 1572 | 9.2% |
| 6 | 1114 | 6.6% |
| Q | 1030 | 6.1% |
| T | 836 | 4.9% |
| 5 | 786 | 4.6% |
| 9 | 754 | 4.4% |
| O | 522 | 3.1% |
| 2 | 504 | 3.0% |
| Other values (31) | 5838 |
Most occurring blocks
| Value | Count | Frequency (%) |
| (unknown) | 17004 |
Most frequent character per block
(unknown)
| Value | Count | Frequency (%) |
| H | 2072 | 12.2% |
| A | 1976 | 11.6% |
| 8 | 1572 | 9.2% |
| 6 | 1114 | 6.6% |
| Q | 1030 | 6.1% |
| T | 836 | 4.9% |
| 5 | 786 | 4.6% |
| 9 | 754 | 4.4% |
| O | 522 | 3.1% |
| 2 | 504 | 3.0% |
| Other values (31) | 5838 |
Patient/OriginatingSpecimen_pathology
Boolean
High correlation  Imbalance 
| Distinct | 2 |
|---|---|
| Distinct (%) | 0.1% |
| Missing | 9 |
| Missing (%) | 0.3% |
| Memory size | 5.5 KiB |
| False | |
|---|---|
| True | |
| (Missing) | 9 |
| Value | Count | Frequency (%) |
| False | 2436 | |
| True | 288 | 10.5% |
| (Missing) | 9 | 0.3% |
Passage_pathology
Categorical
High correlation  Missing 
| Distinct | 5 |
|---|---|
| Distinct (%) | 0.2% |
| Missing | 297 |
| Missing (%) | 10.9% |
| Memory size | 21.5 KiB |
| 1.0 | |
|---|---|
| 0.0 | |
| 2.0 | |
| 3.0 | 52 |
| 4.0 | 36 |
Length
| Max length | 3 |
|---|---|
| Median length | 3 |
| Mean length | 3 |
| Min length | 3 |
Unique
| Unique | 0 ? |
|---|---|
| Unique (%) | 0.0% |
Sample
| 1st row | 0.0 |
|---|---|
| 2nd row | 2.0 |
| 3rd row | 1.0 |
| 4th row | 1.0 |
| 5th row | 1.0 |
Common Values
| Value | Count | Frequency (%) |
| 1.0 | 1144 | |
| 0.0 | 852 | |
| 2.0 | 352 | 12.9% |
| 3.0 | 52 | 1.9% |
| 4.0 | 36 | 1.3% |
| (Missing) | 297 | 10.9% |
Length
Common Values (Plot)
| Value | Count | Frequency (%) |
| 1.0 | 1144 | |
| 0.0 | 852 | |
| 2.0 | 352 | 14.4% |
| 3.0 | 52 | 2.1% |
| 4.0 | 36 | 1.5% |
Most occurring characters
| Value | Count | Frequency (%) |
| 0 | 3288 | |
| . | 2436 | |
| 1 | 1144 | 15.7% |
| 2 | 352 | 4.8% |
| 3 | 52 | 0.7% |
| 4 | 36 | 0.5% |
Most occurring categories
| Value | Count | Frequency (%) |
| (unknown) | 7308 |
Most frequent character per category
(unknown)
| Value | Count | Frequency (%) |
| 0 | 3288 | |
| . | 2436 | |
| 1 | 1144 | 15.7% |
| 2 | 352 | 4.8% |
| 3 | 52 | 0.7% |
| 4 | 36 | 0.5% |
Most occurring scripts
| Value | Count | Frequency (%) |
| (unknown) | 7308 |
Most frequent character per script
(unknown)
| Value | Count | Frequency (%) |
| 0 | 3288 | |
| . | 2436 | |
| 1 | 1144 | 15.7% |
| 2 | 352 | 4.8% |
| 3 | 52 | 0.7% |
| 4 | 36 | 0.5% |
Most occurring blocks
| Value | Count | Frequency (%) |
| (unknown) | 7308 |
Most frequent character per block
(unknown)
| Value | Count | Frequency (%) |
| 0 | 3288 | |
| . | 2436 | |
| 1 | 1144 | 15.7% |
| 2 | 352 | 4.8% |
| 3 | 52 | 0.7% |
| 4 | 36 | 0.5% |
PDM Type_pathology
Categorical
High correlation  Imbalance 
| Distinct | 2 |
|---|---|
| Distinct (%) | 0.1% |
| Missing | 9 |
| Missing (%) | 0.3% |
| Memory size | 21.5 KiB |
| PDX | |
|---|---|
| Patient/Originator Specimen |
Length
| Max length | 27 |
|---|---|
| Median length | 3 |
| Mean length | 5.5374449 |
| Min length | 3 |
Unique
| Unique | 0 ? |
|---|---|
| Unique (%) | 0.0% |
Sample
| 1st row | PDX |
|---|---|
| 2nd row | PDX |
| 3rd row | PDX |
| 4th row | PDX |
| 5th row | PDX |
Common Values
| Value | Count | Frequency (%) |
| PDX | 2436 | |
| Patient/Originator Specimen | 288 | 10.5% |
| (Missing) | 9 | 0.3% |
Length
Common Values (Plot)
| Value | Count | Frequency (%) |
| pdx | 2436 | |
| patient/originator | 288 | 9.6% |
| specimen | 288 | 9.6% |
Most occurring characters
| Value | Count | Frequency (%) |
| P | 2724 | |
| D | 2436 | |
| X | 2436 | |
| i | 1152 | |
| t | 864 | 5.7% |
| e | 864 | 5.7% |
| n | 864 | 5.7% |
| a | 576 | 3.8% |
| r | 576 | 3.8% |
| / | 288 | 1.9% |
| Other values (8) | 2304 |
Most occurring categories
| Value | Count | Frequency (%) |
| (unknown) | 15084 |
Most frequent character per category
(unknown)
| Value | Count | Frequency (%) |
| P | 2724 | |
| D | 2436 | |
| X | 2436 | |
| i | 1152 | |
| t | 864 | 5.7% |
| e | 864 | 5.7% |
| n | 864 | 5.7% |
| a | 576 | 3.8% |
| r | 576 | 3.8% |
| / | 288 | 1.9% |
| Other values (8) | 2304 |
Most occurring scripts
| Value | Count | Frequency (%) |
| (unknown) | 15084 |
Most frequent character per script
(unknown)
| Value | Count | Frequency (%) |
| P | 2724 | |
| D | 2436 | |
| X | 2436 | |
| i | 1152 | |
| t | 864 | 5.7% |
| e | 864 | 5.7% |
| n | 864 | 5.7% |
| a | 576 | 3.8% |
| r | 576 | 3.8% |
| / | 288 | 1.9% |
| Other values (8) | 2304 |
Most occurring blocks
| Value | Count | Frequency (%) |
| (unknown) | 15084 |
Most frequent character per block
(unknown)
| Value | Count | Frequency (%) |
| P | 2724 | |
| D | 2436 | |
| X | 2436 | |
| i | 1152 | |
| t | 864 | 5.7% |
| e | 864 | 5.7% |
| n | 864 | 5.7% |
| a | 576 | 3.8% |
| r | 576 | 3.8% |
| / | 288 | 1.9% |
| Other values (8) | 2304 |
Tumor Grade_pathology
Categorical
High correlation  Imbalance 
| Distinct | 4 |
|---|---|
| Distinct (%) | 0.1% |
| Missing | 9 |
| Missing (%) | 0.3% |
| Memory size | 21.5 KiB |
| <Unknown> | |
|---|---|
| Low grade or well differentiated | 90 |
| High grade or poorly differentiated | 32 |
| Intermediate grade or moderately differentiated | 28 |
Length
| Max length | 47 |
|---|---|
| Median length | 9 |
| Mean length | 10.455947 |
| Min length | 9 |
Unique
| Unique | 0 ? |
|---|---|
| Unique (%) | 0.0% |
Sample
| 1st row | <Unknown> |
|---|---|
| 2nd row | <Unknown> |
| 3rd row | <Unknown> |
| 4th row | <Unknown> |
| 5th row | <Unknown> |
Common Values
| Value | Count | Frequency (%) |
| <Unknown> | 2574 | |
| Low grade or well differentiated | 90 | 3.3% |
| High grade or poorly differentiated | 32 | 1.2% |
| Intermediate grade or moderately differentiated | 28 | 1.0% |
| (Missing) | 9 | 0.3% |
Length
Common Values (Plot)
| Value | Count | Frequency (%) |
| unknown | 2574 | |
| grade | 150 | 4.5% |
| differentiated | 150 | 4.5% |
| or | 150 | 4.5% |
| low | 90 | 2.7% |
| well | 90 | 2.7% |
| high | 32 | 1.0% |
| poorly | 32 | 1.0% |
| intermediate | 28 | 0.8% |
| moderately | 28 | 0.8% |
Most occurring characters
| Value | Count | Frequency (%) |
| n | 7900 | |
| o | 2906 | 10.2% |
| w | 2754 | 9.7% |
| < | 2574 | 9.0% |
| k | 2574 | 9.0% |
| U | 2574 | 9.0% |
| > | 2574 | 9.0% |
| e | 830 | 2.9% |
| 600 | 2.1% | |
| r | 538 | 1.9% |
| Other values (14) | 2658 | 9.3% |
Most occurring categories
| Value | Count | Frequency (%) |
| (unknown) | 28482 |
Most frequent character per category
(unknown)
| Value | Count | Frequency (%) |
| n | 7900 | |
| o | 2906 | 10.2% |
| w | 2754 | 9.7% |
| < | 2574 | 9.0% |
| k | 2574 | 9.0% |
| U | 2574 | 9.0% |
| > | 2574 | 9.0% |
| e | 830 | 2.9% |
| 600 | 2.1% | |
| r | 538 | 1.9% |
| Other values (14) | 2658 | 9.3% |
Most occurring scripts
| Value | Count | Frequency (%) |
| (unknown) | 28482 |
Most frequent character per script
(unknown)
| Value | Count | Frequency (%) |
| n | 7900 | |
| o | 2906 | 10.2% |
| w | 2754 | 9.7% |
| < | 2574 | 9.0% |
| k | 2574 | 9.0% |
| U | 2574 | 9.0% |
| > | 2574 | 9.0% |
| e | 830 | 2.9% |
| 600 | 2.1% | |
| r | 538 | 1.9% |
| Other values (14) | 2658 | 9.3% |
Most occurring blocks
| Value | Count | Frequency (%) |
| (unknown) | 28482 |
Most frequent character per block
(unknown)
| Value | Count | Frequency (%) |
| n | 7900 | |
| o | 2906 | 10.2% |
| w | 2754 | 9.7% |
| < | 2574 | 9.0% |
| k | 2574 | 9.0% |
| U | 2574 | 9.0% |
| > | 2574 | 9.0% |
| e | 830 | 2.9% |
| 600 | 2.1% | |
| r | 538 | 1.9% |
| Other values (14) | 2658 | 9.3% |
Tumor Content_pathology
Real number (ℝ)
High correlation 
| Distinct | 9 |
|---|---|
| Distinct (%) | 0.3% |
| Missing | 9 |
| Missing (%) | 0.3% |
| Infinite | 0 |
| Infinite (%) | 0.0% |
| Mean | 86.292217 |
| Minimum | 40 |
|---|---|
| Maximum | 100 |
| Zeros | 0 |
| Zeros (%) | 0.0% |
| Negative | 0 |
| Negative (%) | 0.0% |
| Memory size | 21.5 KiB |
Quantile statistics
| Minimum | 40 |
|---|---|
| 5-th percentile | 40 |
| Q1 | 85 |
| median | 90 |
| Q3 | 95 |
| 95-th percentile | 95 |
| Maximum | 100 |
| Range | 60 |
| Interquartile range (IQR) | 10 |
Descriptive statistics
| Standard deviation | 15.178596 |
|---|---|
| Coefficient of variation (CV) | 0.17589763 |
| Kurtosis | 4.5816666 |
| Mean | 86.292217 |
| Median Absolute Deviation (MAD) | 5 |
| Skewness | -2.3913432 |
| Sum | 235060 |
| Variance | 230.38979 |
| Monotonicity | Not monotonic |
| Value | Count | Frequency (%) |
| 95 | 984 | |
| 90 | 798 | |
| 85 | 538 | |
| 40 | 234 | 8.6% |
| 100 | 90 | 3.3% |
| 70 | 34 | 1.2% |
| 60 | 16 | 0.6% |
| 80 | 16 | 0.6% |
| 75 | 14 | 0.5% |
| (Missing) | 9 | 0.3% |
| Value | Count | Frequency (%) |
| 40 | 234 | 8.6% |
| 60 | 16 | 0.6% |
| 70 | 34 | 1.2% |
| 75 | 14 | 0.5% |
| 80 | 16 | 0.6% |
| 85 | 538 | |
| 90 | 798 | |
| 95 | 984 | |
| 100 | 90 | 3.3% |
| Value | Count | Frequency (%) |
| 100 | 90 | 3.3% |
| 95 | 984 | |
| 90 | 798 | |
| 85 | 538 | |
| 80 | 16 | 0.6% |
| 75 | 14 | 0.5% |
| 70 | 34 | 1.2% |
| 60 | 16 | 0.6% |
| 40 | 234 | 8.6% |
Necrosis_pathology
Categorical
High correlation  Imbalance 
| Distinct | 5 |
|---|---|
| Distinct (%) | 0.2% |
| Missing | 9 |
| Missing (%) | 0.3% |
| Memory size | 21.5 KiB |
| 0.0 | |
|---|---|
| 10.0 | |
| 50.0 | |
| 5.0 | 44 |
| 15.0 | 14 |
Length
| Max length | 4 |
|---|---|
| Median length | 3 |
| Mean length | 3.1769457 |
| Min length | 3 |
Unique
| Unique | 0 ? |
|---|---|
| Unique (%) | 0.0% |
Sample
| 1st row | 0.0 |
|---|---|
| 2nd row | 10.0 |
| 3rd row | 0.0 |
| 4th row | 0.0 |
| 5th row | 0.0 |
Common Values
| Value | Count | Frequency (%) |
| 0.0 | 2198 | |
| 10.0 | 234 | 8.6% |
| 50.0 | 234 | 8.6% |
| 5.0 | 44 | 1.6% |
| 15.0 | 14 | 0.5% |
| (Missing) | 9 | 0.3% |
Length
Common Values (Plot)
| Value | Count | Frequency (%) |
| 0.0 | 2198 | |
| 10.0 | 234 | 8.6% |
| 50.0 | 234 | 8.6% |
| 5.0 | 44 | 1.6% |
| 15.0 | 14 | 0.5% |
Most occurring characters
| Value | Count | Frequency (%) |
| 0 | 5390 | |
| . | 2724 | |
| 5 | 292 | 3.4% |
| 1 | 248 | 2.9% |
Most occurring categories
| Value | Count | Frequency (%) |
| (unknown) | 8654 |
Most frequent character per category
(unknown)
| Value | Count | Frequency (%) |
| 0 | 5390 | |
| . | 2724 | |
| 5 | 292 | 3.4% |
| 1 | 248 | 2.9% |
Most occurring scripts
| Value | Count | Frequency (%) |
| (unknown) | 8654 |
Most frequent character per script
(unknown)
| Value | Count | Frequency (%) |
| 0 | 5390 | |
| . | 2724 | |
| 5 | 292 | 3.4% |
| 1 | 248 | 2.9% |
Most occurring blocks
| Value | Count | Frequency (%) |
| (unknown) | 8654 |
Most frequent character per block
(unknown)
| Value | Count | Frequency (%) |
| 0 | 5390 | |
| . | 2724 | |
| 5 | 292 | 3.4% |
| 1 | 248 | 2.9% |
Stromal_pathology
Real number (ℝ)
High correlation  Zeros 
| Distinct | 7 |
|---|---|
| Distinct (%) | 0.3% |
| Missing | 9 |
| Missing (%) | 0.3% |
| Infinite | 0 |
| Infinite (%) | 0.0% |
| Mean | 7.9258443 |
| Minimum | 0 |
|---|---|
| Maximum | 40 |
| Zeros | 218 |
| Zeros (%) | 8.0% |
| Negative | 0 |
| Negative (%) | 0.0% |
| Memory size | 21.5 KiB |
Quantile statistics
| Minimum | 0 |
|---|---|
| 5-th percentile | 0 |
| Q1 | 5 |
| median | 5 |
| Q3 | 10 |
| 95-th percentile | 15 |
| Maximum | 40 |
| Range | 40 |
| Interquartile range (IQR) | 5 |
Descriptive statistics
| Standard deviation | 5.3325345 |
|---|---|
| Coefficient of variation (CV) | 0.67280333 |
| Kurtosis | 9.2886266 |
| Mean | 7.9258443 |
| Median Absolute Deviation (MAD) | 5 |
| Skewness | 2.1530975 |
| Sum | 21590 |
| Variance | 28.435924 |
| Monotonicity | Not monotonic |
| Value | Count | Frequency (%) |
| 5 | 1234 | |
| 10 | 930 | |
| 15 | 276 | 10.1% |
| 0 | 218 | 8.0% |
| 30 | 34 | 1.2% |
| 20 | 16 | 0.6% |
| 40 | 16 | 0.6% |
| (Missing) | 9 | 0.3% |
| Value | Count | Frequency (%) |
| 0 | 218 | 8.0% |
| 5 | 1234 | |
| 10 | 930 | |
| 15 | 276 | 10.1% |
| 20 | 16 | 0.6% |
| 30 | 34 | 1.2% |
| 40 | 16 | 0.6% |
| Value | Count | Frequency (%) |
| 40 | 16 | 0.6% |
| 30 | 34 | 1.2% |
| 20 | 16 | 0.6% |
| 15 | 276 | 10.1% |
| 10 | 930 | |
| 5 | 1234 | |
| 0 | 218 | 8.0% |
Inflammatory Cell_pathology
Categorical
High correlation 
| Distinct | 3 |
|---|---|
| Distinct (%) | 0.1% |
| Missing | 9 |
| Missing (%) | 0.3% |
| Memory size | 21.5 KiB |
| Absent/No Inflammation | |
|---|---|
| <Unknown> | |
| 1+ (Low) | 168 |
Length
| Max length | 22 |
|---|---|
| Median length | 22 |
| Mean length | 19.504405 |
| Min length | 8 |
Unique
| Unique | 0 ? |
|---|---|
| Unique (%) | 0.0% |
Sample
| 1st row | Absent/No Inflammation |
|---|---|
| 2nd row | Absent/No Inflammation |
| 3rd row | Absent/No Inflammation |
| 4th row | Absent/No Inflammation |
| 5th row | Absent/No Inflammation |
Common Values
| Value | Count | Frequency (%) |
| Absent/No Inflammation | 2214 | |
| <Unknown> | 342 | 12.5% |
| 1+ (Low) | 168 | 6.1% |
| (Missing) | 9 | 0.3% |
Length
Common Values (Plot)
| Value | Count | Frequency (%) |
| absent/no | 2214 | |
| inflammation | 2214 | |
| unknown | 342 | 6.7% |
| 1 | 168 | 3.3% |
| low | 168 | 3.3% |
Most occurring characters
| Value | Count | Frequency (%) |
| n | 7668 | |
| o | 4938 | 9.3% |
| t | 4428 | 8.3% |
| a | 4428 | 8.3% |
| m | 4428 | 8.3% |
| 2382 | 4.5% | |
| s | 2214 | 4.2% |
| e | 2214 | 4.2% |
| b | 2214 | 4.2% |
| A | 2214 | 4.2% |
| Other values (16) | 16002 |
Most occurring categories
| Value | Count | Frequency (%) |
| (unknown) | 53130 |
Most frequent character per category
(unknown)
| Value | Count | Frequency (%) |
| n | 7668 | |
| o | 4938 | 9.3% |
| t | 4428 | 8.3% |
| a | 4428 | 8.3% |
| m | 4428 | 8.3% |
| 2382 | 4.5% | |
| s | 2214 | 4.2% |
| e | 2214 | 4.2% |
| b | 2214 | 4.2% |
| A | 2214 | 4.2% |
| Other values (16) | 16002 |
Most occurring scripts
| Value | Count | Frequency (%) |
| (unknown) | 53130 |
Most frequent character per script
(unknown)
| Value | Count | Frequency (%) |
| n | 7668 | |
| o | 4938 | 9.3% |
| t | 4428 | 8.3% |
| a | 4428 | 8.3% |
| m | 4428 | 8.3% |
| 2382 | 4.5% | |
| s | 2214 | 4.2% |
| e | 2214 | 4.2% |
| b | 2214 | 4.2% |
| A | 2214 | 4.2% |
| Other values (16) | 16002 |
Most occurring blocks
| Value | Count | Frequency (%) |
| (unknown) | 53130 |
Most frequent character per block
(unknown)
| Value | Count | Frequency (%) |
| n | 7668 | |
| o | 4938 | 9.3% |
| t | 4428 | 8.3% |
| a | 4428 | 8.3% |
| m | 4428 | 8.3% |
| 2382 | 4.5% | |
| s | 2214 | 4.2% |
| e | 2214 | 4.2% |
| b | 2214 | 4.2% |
| A | 2214 | 4.2% |
| Other values (16) | 16002 |
Pathology Notes_pathology
Categorical
High correlation 
| Distinct | 21 |
|---|---|
| Distinct (%) | 0.8% |
| Missing | 9 |
| Missing (%) | 0.3% |
| Memory size | 21.5 KiB |
| Gastrointestinal stromal tumor (GIST), epithelioid. The tumor is composed of nests of rounded epithelioid cells with clear to eosinophilic cytoplasm showing mild to moderate pleomorphism with no spindle type cells. Rare mitosis observed. The tumor is diffusely positive for CD34, and rare cells are positive for SMA. Conventional grading of GIST is not done. | |
|---|---|
| Gastrointestinal stromal tumor (GIST), epithelioid. The tumor is composed of nests of rounded epithelioid cells with clear to eosinophilic cytoplasm showing mild to moderate pleomorphism with no spindle type cells. Rare mitosis observed. The tumor is diffusely positive for CD34 in another passage. Conventional grading of GIST is not done. | |
| Gastrointestinal stromal tumor (GIST), epithelioid. The tumor is composed of nests of rounded epithelioid cells with clear to eosinophilic cytoplasm showing mild to moderate pleomorphism with no spindle type cells. Rare mitosis observed. A previous passage of the tumor was positive for CD34. Conventional grading of GIST is not done. | |
| Gastrointestinal stromal tumor (GIST), epithelioid. The tumor is composed of nests of rounded epithelioid cells with clear to eosinophilic cytoplasm showing mild to moderate pleomorphism with no spindle type cells. Rare mitosis observed. The tumor is diffusely positive for CD34, and rare cells are positive for SMA. Conventional grading of GIST is not done. | |
| Gastrointestinal stromal tumor (GIST), epithelioid. The tumor is composed of nests of rounded epithelioid cells with clear to eosinophilic cytoplasm showing mild to moderate pleomorphism with no spindle type cells. Rare mitosis observed. The previous passage of the tumor was positive for CD34. Conventional grading of GIST is not done. | |
| Other values (16) |
Length
| Max length | 658 |
|---|---|
| Median length | 579 |
| Mean length | 375.39648 |
| Min length | 335 |
Unique
| Unique | 0 ? |
|---|---|
| Unique (%) | 0.0% |
Sample
| 1st row | Gastrointestinal stromal tumor (GIST), epithelioid. The tumor is composed of nests of rounded epithelioid cells with clear to eosinophilic cytoplasm showing mild to moderate pleomorphism with no spindle type cells. Rare mitosis observed. The tumor is diffusely positive for CD34, and rare cells are positive for SMA. Conventional grading of GIST is not done. |
|---|---|
| 2nd row | Gastrointestinal stromal tumor (GIST), epithelioid. The tumor is composed of nests of rounded epithelioid cells with clear to eosinophilic cytoplasm showing mild to moderate pleomorphism with no spindle type cells. Rare mitosis observed. A previous passage of the tumor was positive for CD34. Conventional grading of GIST is not done. |
| 3rd row | Gastrointestinal stromal tumor (GIST), epithelioid. The tumor is composed of nests of rounded epithelioid cells with clear to eosinophilic cytoplasm showing mild to moderate pleomorphism with no spindle type cells. Rare mitosis observed. The previous passage of the tumor was positive for CD34. Conventional grading of GIST is not done. |
| 4th row | Gastrointestinal stromal tumor (GIST), epithelioid. The tumor is composed of nests of rounded epithelioid cells with clear to eosinophilic cytoplasm showing mild to moderate pleomorphism with no spindle type cells. Rare mitosis observed. The tumor is diffusely positive for CD34, and rare cells are positive for SMA. Conventional grading of GIST is not done. |
| 5th row | Gastrointestinal stromal tumor (GIST), epithelioid. The tumor is composed of nests of rounded epithelioid cells with clear to eosinophilic cytoplasm showing mild to moderate pleomorphism with no spindle type cells. Rare mitosis observed. The tumor is diffusely positive for CD34, and rare cells are positive for SMA. Conventional grading of GIST is not done. |
Common Values
| Value | Count | Frequency (%) |
| Gastrointestinal stromal tumor (GIST), epithelioid. The tumor is composed of nests of rounded epithelioid cells with clear to eosinophilic cytoplasm showing mild to moderate pleomorphism with no spindle type cells. Rare mitosis observed. The tumor is diffusely positive for CD34, and rare cells are positive for SMA. Conventional grading of GIST is not done. | 702 | |
| Gastrointestinal stromal tumor (GIST), epithelioid. The tumor is composed of nests of rounded epithelioid cells with clear to eosinophilic cytoplasm showing mild to moderate pleomorphism with no spindle type cells. Rare mitosis observed. The tumor is diffusely positive for CD34 in another passage. Conventional grading of GIST is not done. | 468 | |
| Gastrointestinal stromal tumor (GIST), epithelioid. The tumor is composed of nests of rounded epithelioid cells with clear to eosinophilic cytoplasm showing mild to moderate pleomorphism with no spindle type cells. Rare mitosis observed. A previous passage of the tumor was positive for CD34. Conventional grading of GIST is not done. | 234 | 8.6% |
| Gastrointestinal stromal tumor (GIST), epithelioid. The tumor is composed of nests of rounded epithelioid cells with clear to eosinophilic cytoplasm showing mild to moderate pleomorphism with no spindle type cells. Rare mitosis observed. The tumor is diffusely positive for CD34, and rare cells are positive for SMA. Conventional grading of GIST is not done. | 234 | 8.6% |
| Gastrointestinal stromal tumor (GIST), epithelioid. The tumor is composed of nests of rounded epithelioid cells with clear to eosinophilic cytoplasm showing mild to moderate pleomorphism with no spindle type cells. Rare mitosis observed. The previous passage of the tumor was positive for CD34. Conventional grading of GIST is not done. | 234 | 8.6% |
| Gastrointestinal stromal tumor (GIST), epithelioid. The tumor is composed of nests of rounded epithelioid cells with clear to eosinophilic cytoplasm showing mild to moderate pleomorphism with no spindle type cells. Rare mitosis observed. Another passage of the tumor was positive for CD34. Conventional grading of GIST is not done. | 234 | 8.6% |
| Gastrointestinal Stromal Tumors (GIST) The individual cells reveal ill-defined cell borders with ovoid nuclei, fine nuclear chromatin, and inconspicuous nucleoli. The cytoplasm has a pale, eosinophilic, and fibrillary quality. The stroma exhibit areas of myxoid change. Many gastric spindle cell GISTs show extensive paranuclear vacuolization. | 180 | 6.6% |
| Spindle cell Gastrointestinal Stromal Tumors (GIST) account for nearly 70% of cases and are composed of cells arranged in short fascicles and whorls. The stroma may exhibit areas of myxoid change. The individual cells reveal ill-defined cell borders with ovoid nuclei, fine nuclear chromatin, and inconspicuous nucleoli. The cytoplasm has a pale, eosinophilic, and fibrillary quality. Many gastric spindle cell GISTs show extensive paranuclear vacuolization. The degree of paranuclear vacuolization, however, is much more pronounced in GISTs than it is in smooth muscle tumors. | 94 | 3.4% |
| Spindle cell Gastrointestinal Stromal Tumors (GIST) account for nearly 70% of cases and are composed of cells arranged in short fascicles and whorls. The stroma exhibit areas of myxoid change. The individual cells reveal ill-defined cell borders with ovoid nuclei, fine nuclear chromatin, and inconspicuous nucleoli. The cytoplasm has a pale, eosinophilic, and fibrillary quality. Many gastric spindle cell GISTs show extensive paranuclear vacuolization. The degree of paranuclear vacuolization, however, is much more pronounced in GISTs than it is in smooth muscle tumors. | 70 | 2.6% |
| Gastrointestinal stromal tumor (GIST). The tumor is composed of mixture of bland spindle and epithelioid cells that have faintly eosinophilic cytoplasm in a syncytial pattern; the cells have pleomorphic nuclei with inconspicuous nucleoli; occasional palisading pattern are present. Mitosis is difficult to find and is probably rare. The originator tumor was diffusely positive for CD34. | 54 | 2.0% |
| Other values (11) | 220 | 8.0% |
Length
| Value | Count | Frequency (%) |
| of | 8480 | 5.7% |
| tumor | 6862 | 4.6% |
| is | 6726 | 4.5% |
| the | 6452 | 4.3% |
| cells | 6204 | 4.2% |
| with | 4844 | 3.2% |
| gist | 4830 | 3.2% |
| epithelioid | 4320 | 2.9% |
| to | 4284 | 2.9% |
| for | 3384 | 2.3% |
| Other values (138) | 92820 |
Most occurring characters
| Value | Count | Frequency (%) |
| 152220 | ||
| o | 87044 | 8.5% |
| e | 82398 | 8.1% |
| i | 79698 | 7.8% |
| s | 64268 | 6.3% |
| t | 58750 | 5.7% |
| l | 52390 | 5.1% |
| n | 49018 | 4.8% |
| r | 46046 | 4.5% |
| a | 45070 | 4.4% |
| Other values (41) | 305678 |
Most occurring categories
| Value | Count | Frequency (%) |
| (unknown) | 1022580 |
Most frequent character per category
(unknown)
| Value | Count | Frequency (%) |
| 152220 | ||
| o | 87044 | 8.5% |
| e | 82398 | 8.1% |
| i | 79698 | 7.8% |
| s | 64268 | 6.3% |
| t | 58750 | 5.7% |
| l | 52390 | 5.1% |
| n | 49018 | 4.8% |
| r | 46046 | 4.5% |
| a | 45070 | 4.4% |
| Other values (41) | 305678 |
Most occurring scripts
| Value | Count | Frequency (%) |
| (unknown) | 1022580 |
Most frequent character per script
(unknown)
| Value | Count | Frequency (%) |
| 152220 | ||
| o | 87044 | 8.5% |
| e | 82398 | 8.1% |
| i | 79698 | 7.8% |
| s | 64268 | 6.3% |
| t | 58750 | 5.7% |
| l | 52390 | 5.1% |
| n | 49018 | 4.8% |
| r | 46046 | 4.5% |
| a | 45070 | 4.4% |
| Other values (41) | 305678 |
Most occurring blocks
| Value | Count | Frequency (%) |
| (unknown) | 1022580 |
Most frequent character per block
(unknown)
| Value | Count | Frequency (%) |
| 152220 | ||
| o | 87044 | 8.5% |
| e | 82398 | 8.1% |
| i | 79698 | 7.8% |
| s | 64268 | 6.3% |
| t | 58750 | 5.7% |
| l | 52390 | 5.1% |
| n | 49018 | 4.8% |
| r | 46046 | 4.5% |
| a | 45070 | 4.4% |
| Other values (41) | 305678 |
Interactions
Correlations
| %European(CEU)_df_pinfo_paciente_specimens | %European(CEU)_df_race_paciente_specimens | %Native and LatinAmerican (NA)_df_pinfo_paciente_specimens | %Native and LatinAmerican (NA)_df_race_paciente_specimens | %West African(YRI)_df_pinfo_paciente_specimens | %West African(YRI)_df_race_paciente_specimens | Able to ViablyPassage in nude mice_specimen_specimens | AdditionalMedicalHistory_df_pinfo_paciente_specimens | Age atDiagnosis_df_pinfo_paciente_specimens | Age atSampling_specimen_specimens | Best Response_trathistory_paciente_specimens | BiologicalSex_df_pinfo_paciente_specimens | BiopsySite_specimen_specimens | Chr End_gene | Chr Start_gene | Chr_gene | Consensus Whole ExomeSequence Avail_specimen_specimens | DiagnosisSubtype_df_pinfo_paciente_specimens | DiagnosisSubtype_df_race_paciente_specimens | DiagnosisSubtype_pathology | DiagnosisSubtype_samples | DiagnosisSubtype_specimen_specimens | DiagnosisSubtype_trathistory_paciente_specimens | Ethnicity_df_pinfo_paciente_specimens | Existing Variant_gene | Grade StageInformation_df_pinfo_paciente_specimens | HGVS ProteinChange_gene | HGVS cDNAChange_gene | Has KnownMetastaticDisease_df_pinfo_paciente_specimens | Has Smoked100 Cigarettes_df_pinfo_paciente_specimens | HugoSymbol_gene | Human PathogenTesting Summary_specimen_specimens | InferredAncestry_df_pinfo_paciente_specimens | InferredAncestry_df_race_paciente_specimens | Inflammatory Cell_pathology | MSI Status_specimen_specimens | ModelNotes_specimen_specimens | Molecular andIHC Data_df_pinfo_paciente_specimens | MutationEffect_gene | Necrosis_pathology | Occupation_df_pinfo_paciente_specimens | OncoKB Cancer GenePanel Data Avail_samples | Oncogenicity_gene | PDM Type_pathology | PDM Type_samples | PDX GrowthCurve Avail_specimen_specimens | Passage_pathology | Passage_samples | Pathology Notes_pathology | PathologyAvail_samples | Patient ID | Patient/OriginatingSpecimen_pathology | Patient/OriginatingSpecimen_samples | PatientNotes_df_pinfo_paciente_specimens | ProvidedTissue Origin_specimen_specimens | RNASeqAvail_samples | Race_df_pinfo_paciente_specimens | Sample ID_gene | Sample ID_pathology | Sample ID_samples | Self-ReportedEthnicity_df_race_paciente_specimens | Self-ReportedRace_df_race_paciente_specimens | Specimen ID | StandardizedRegimen_trathistory_paciente_specimens | Stromal_pathology | Timing_trathistory_paciente_specimens | Total Reads_gene | Tumor Content_pathology | Tumor Grade_pathology | Variant AlleleFrequency_gene | VariantClass_gene | Whole ExomeSequence Avail_samples | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| %European(CEU)_df_pinfo_paciente_specimens | 1.000 | 1.000 | 1.000 | 1.000 | 0.990 | 0.990 | 0.704 | 0.999 | 0.733 | 0.610 | 0.805 | 0.986 | 0.999 | 1.000 | 1.000 | 1.000 | 0.144 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 0.509 | 1.000 | 1.000 | 0.580 | 0.886 | 1.000 | 0.580 | 0.820 | 0.820 | 0.417 | 0.144 | 0.993 | 0.999 | 1.000 | 0.162 | 0.999 | 0.107 | 1.000 | 0.034 | 0.028 | 0.144 | 0.468 | 0.468 | 0.952 | 0.000 | 0.999 | 0.034 | 0.028 | 0.999 | 0.572 | 0.109 | 0.995 | 1.000 | 0.940 | 0.935 | 1.000 | 0.995 | 0.999 | 0.466 | 0.549 | 0.055 | 1.000 | 0.378 | 0.679 | 1.000 | 1.000 | 0.107 |
| %European(CEU)_df_race_paciente_specimens | 1.000 | 1.000 | 1.000 | 1.000 | 0.990 | 0.990 | 0.704 | 0.999 | 0.733 | 0.610 | 0.805 | 0.986 | 0.999 | 1.000 | 1.000 | 1.000 | 0.144 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 0.509 | 1.000 | 1.000 | 0.580 | 0.886 | 1.000 | 0.580 | 0.820 | 0.820 | 0.417 | 0.144 | 0.993 | 0.999 | 1.000 | 0.162 | 0.999 | 0.107 | 1.000 | 0.034 | 0.028 | 0.144 | 0.468 | 0.468 | 0.952 | 0.000 | 0.999 | 0.034 | 0.028 | 0.999 | 0.572 | 0.109 | 0.995 | 1.000 | 0.940 | 0.935 | 1.000 | 0.995 | 0.999 | 0.466 | 0.549 | 0.055 | 1.000 | 0.378 | 0.679 | 1.000 | 1.000 | 0.107 |
| %Native and LatinAmerican (NA)_df_pinfo_paciente_specimens | 1.000 | 1.000 | 1.000 | 0.833 | 0.000 | 0.000 | 0.162 | 1.000 | 0.773 | 0.773 | 0.992 | 0.085 | 0.999 | 1.000 | 1.000 | 1.000 | 0.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 0.833 | 1.000 | 0.068 | 1.000 | 1.000 | 0.072 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 0.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 0.000 | 1.000 | 1.000 | 1.000 | 1.000 | 0.999 | 1.000 | 1.000 | 1.000 | 0.044 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 0.833 | 1.000 | 0.999 | 0.578 | 1.000 | 0.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 |
| %Native and LatinAmerican (NA)_df_race_paciente_specimens | 1.000 | 1.000 | 0.833 | 1.000 | 0.000 | 0.000 | 0.162 | 1.000 | 0.773 | 0.773 | 0.992 | 0.085 | 0.999 | 1.000 | 1.000 | 1.000 | 0.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 0.833 | 1.000 | 0.068 | 1.000 | 1.000 | 0.072 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 0.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 0.000 | 1.000 | 1.000 | 1.000 | 1.000 | 0.999 | 1.000 | 1.000 | 1.000 | 0.044 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 0.833 | 1.000 | 0.999 | 0.578 | 1.000 | 0.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 |
| %West African(YRI)_df_pinfo_paciente_specimens | 0.990 | 0.990 | 0.000 | 0.000 | 1.000 | 1.000 | 0.708 | 0.999 | 0.703 | 0.505 | 0.696 | 0.988 | 0.999 | 1.000 | 1.000 | 1.000 | 0.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 0.000 | 1.000 | 0.622 | 1.000 | 1.000 | 0.562 | 0.535 | 1.000 | 0.067 | 0.707 | 0.707 | 0.417 | 0.000 | 1.000 | 0.999 | 1.000 | 0.162 | 0.999 | 0.107 | 1.000 | 0.034 | 0.028 | 0.000 | 0.468 | 0.468 | 0.952 | 0.000 | 0.999 | 0.034 | 0.028 | 0.999 | 0.563 | 0.109 | 0.707 | 1.000 | 0.940 | 0.935 | 0.000 | 0.707 | 0.999 | 0.394 | 0.549 | 0.059 | 1.000 | 0.378 | 0.679 | 1.000 | 1.000 | 0.107 |
| %West African(YRI)_df_race_paciente_specimens | 0.990 | 0.990 | 0.000 | 0.000 | 1.000 | 1.000 | 0.708 | 0.999 | 0.703 | 0.505 | 0.696 | 0.988 | 0.999 | 1.000 | 1.000 | 1.000 | 0.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 0.000 | 1.000 | 0.622 | 1.000 | 1.000 | 0.562 | 0.535 | 1.000 | 0.067 | 0.707 | 0.707 | 0.417 | 0.000 | 1.000 | 0.999 | 1.000 | 0.162 | 0.999 | 0.107 | 1.000 | 0.034 | 0.028 | 0.000 | 0.468 | 0.468 | 0.952 | 0.000 | 0.999 | 0.034 | 0.028 | 0.999 | 0.563 | 0.109 | 0.707 | 1.000 | 0.940 | 0.935 | 0.000 | 0.707 | 0.999 | 0.394 | 0.549 | 0.059 | 1.000 | 0.378 | 0.679 | 1.000 | 1.000 | 0.107 |
| Able to ViablyPassage in nude mice_specimen_specimens | 0.704 | 0.704 | 0.162 | 0.162 | 0.708 | 0.708 | 1.000 | 0.999 | 0.702 | 0.722 | 0.696 | 0.652 | 0.994 | 1.000 | 1.000 | 1.000 | 0.231 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 0.162 | 1.000 | 0.705 | 1.000 | 1.000 | 0.559 | 0.123 | 1.000 | 0.131 | 0.499 | 0.499 | 0.291 | 0.231 | 1.000 | 1.000 | 1.000 | 0.401 | 0.999 | 0.074 | 1.000 | 0.071 | 0.071 | 0.231 | 0.387 | 0.387 | 0.943 | 0.000 | 0.999 | 0.071 | 0.071 | 0.999 | 0.535 | 0.074 | 0.481 | 1.000 | 0.963 | 0.960 | 0.162 | 0.481 | 0.999 | 0.367 | 0.449 | 0.059 | 1.000 | 0.363 | 0.724 | 1.000 | 1.000 | 0.074 |
| AdditionalMedicalHistory_df_pinfo_paciente_specimens | 0.999 | 0.999 | 1.000 | 1.000 | 0.999 | 0.999 | 0.999 | 1.000 | 1.000 | 1.000 | 0.996 | 0.999 | 1.000 | 1.000 | 1.000 | 1.000 | 0.999 | 0.994 | 0.994 | 0.994 | 0.994 | 0.994 | 0.994 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 0.999 | 0.999 | 1.000 | 0.999 | 0.999 | 0.999 | 0.779 | 0.999 | 1.000 | 1.000 | 1.000 | 0.354 | 1.000 | 0.166 | 1.000 | 0.091 | 0.066 | 0.999 | 0.332 | 0.332 | 0.918 | 0.371 | 1.000 | 0.091 | 0.066 | 1.000 | 0.999 | 0.126 | 0.999 | 1.000 | 0.995 | 0.972 | 1.000 | 0.999 | 1.000 | 0.706 | 0.558 | 0.000 | 1.000 | 0.462 | 0.376 | 1.000 | 1.000 | 0.166 |
| Age atDiagnosis_df_pinfo_paciente_specimens | 0.733 | 0.733 | 0.773 | 0.773 | 0.703 | 0.703 | 0.702 | 1.000 | 1.000 | 0.368 | 0.805 | 0.725 | 0.997 | 1.000 | 1.000 | 1.000 | 0.685 | 0.994 | 0.994 | 0.994 | 0.994 | 0.994 | 0.994 | 0.773 | 1.000 | 0.784 | 1.000 | 1.000 | 0.643 | 0.806 | 1.000 | 0.729 | 0.777 | 0.777 | 0.772 | 0.685 | 0.706 | 1.000 | 1.000 | 0.362 | 0.999 | 0.120 | 1.000 | 0.073 | 0.060 | 0.685 | 0.243 | 0.245 | 0.920 | 0.192 | -0.648 | 0.073 | 0.060 | 1.000 | 0.886 | 0.106 | 0.745 | 1.000 | 0.969 | 0.966 | 0.773 | 0.745 | 0.999 | 0.661 | 0.201 | 0.000 | NaN | -0.103 | 0.222 | NaN | 1.000 | 0.120 |
| Age atSampling_specimen_specimens | 0.610 | 0.610 | 0.773 | 0.773 | 0.505 | 0.505 | 0.722 | 1.000 | 0.368 | 1.000 | 0.662 | 0.458 | 0.895 | 1.000 | 1.000 | 1.000 | 0.893 | 0.994 | 0.994 | 0.994 | 0.994 | 0.994 | 0.994 | 0.773 | 1.000 | 0.955 | 1.000 | 1.000 | 0.777 | 0.588 | 1.000 | 0.729 | 0.707 | 0.707 | 0.574 | 0.893 | 1.000 | 1.000 | 1.000 | 0.297 | 0.999 | 0.068 | 1.000 | 0.035 | 0.000 | 0.893 | 0.274 | 0.276 | 0.950 | 0.193 | 0.060 | 0.035 | 0.000 | 1.000 | 0.865 | 0.038 | 0.632 | 1.000 | 0.965 | 0.960 | 0.773 | 0.632 | 0.999 | 0.603 | -0.054 | 0.019 | NaN | 0.095 | 0.559 | NaN | 1.000 | 0.068 |
| Best Response_trathistory_paciente_specimens | 0.805 | 0.805 | 0.992 | 0.992 | 0.696 | 0.696 | 0.696 | 0.996 | 0.805 | 0.662 | 1.000 | 0.462 | 0.702 | 0.000 | 0.000 | 0.000 | 0.021 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.992 | 0.000 | 0.406 | 0.000 | 0.000 | 0.992 | 0.804 | 0.000 | 0.992 | 0.769 | 0.769 | 0.703 | 0.021 | 0.000 | 0.996 | 0.000 | 0.221 | 0.704 | 0.017 | 0.000 | 0.109 | 0.109 | 0.021 | 0.343 | 0.343 | 0.663 | 1.000 | 0.702 | 0.109 | 0.109 | 0.706 | 1.000 | 0.017 | 0.769 | 0.000 | 0.588 | 0.588 | 0.992 | 0.769 | 0.702 | 0.995 | 0.480 | 0.992 | 0.000 | 0.420 | 0.662 | 0.000 | 0.000 | 0.017 |
| BiologicalSex_df_pinfo_paciente_specimens | 0.986 | 0.986 | 0.085 | 0.085 | 0.988 | 0.988 | 0.652 | 0.999 | 0.725 | 0.458 | 0.462 | 1.000 | 0.994 | 1.000 | 1.000 | 1.000 | 0.019 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 0.085 | 1.000 | 0.597 | 1.000 | 1.000 | 0.340 | 0.542 | 1.000 | 0.146 | 0.995 | 0.995 | 0.389 | 0.019 | 0.993 | 0.999 | 1.000 | 0.181 | 0.999 | 0.106 | 1.000 | 0.031 | 0.025 | 0.019 | 0.589 | 0.590 | 0.946 | 0.000 | 0.999 | 0.031 | 0.025 | 0.999 | 0.568 | 0.109 | 0.995 | 1.000 | 0.962 | 0.953 | 0.085 | 0.995 | 0.999 | 0.430 | 0.621 | 0.038 | 1.000 | 0.398 | 0.631 | 1.000 | 1.000 | 0.106 |
| BiopsySite_specimen_specimens | 0.999 | 0.999 | 0.999 | 0.999 | 0.999 | 0.999 | 0.994 | 1.000 | 0.997 | 0.895 | 0.702 | 0.994 | 1.000 | 1.000 | 1.000 | 1.000 | 0.819 | 0.994 | 0.994 | 0.994 | 0.994 | 0.994 | 0.994 | 0.999 | 1.000 | 0.868 | 1.000 | 1.000 | 0.995 | 0.999 | 1.000 | 0.995 | 0.999 | 0.999 | 0.851 | 0.819 | 1.000 | 1.000 | 1.000 | 0.317 | 1.000 | 0.167 | 1.000 | 0.090 | 0.067 | 0.819 | 0.354 | 0.354 | 0.937 | 0.371 | 1.000 | 0.090 | 0.067 | 1.000 | 0.999 | 0.133 | 0.999 | 1.000 | 0.966 | 0.952 | 0.999 | 0.999 | 1.000 | 0.686 | 0.454 | 0.037 | 1.000 | 0.394 | 0.613 | 1.000 | 1.000 | 0.167 |
| Chr End_gene | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 0.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 0.996 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 0.000 | 1.000 | 0.000 | 1.000 | 0.000 | 0.000 | 1.000 | 0.000 | 0.000 | 0.000 | 1.000 | 1.000 | 0.000 | 0.000 | 1.000 | 1.000 | 0.000 | 1.000 | 0.370 | 0.000 | 0.000 | 1.000 | 1.000 | 1.000 | 0.000 | 0.000 | 0.000 | 0.726 | 0.000 | 1.000 | 0.999 | 1.000 | 0.000 |
| Chr Start_gene | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 0.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 0.996 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 0.000 | 1.000 | 0.000 | 1.000 | 0.000 | 0.000 | 1.000 | 0.000 | 0.000 | 0.000 | 1.000 | 1.000 | 0.000 | 0.000 | 1.000 | 1.000 | 0.000 | 1.000 | 0.370 | 0.000 | 0.000 | 1.000 | 1.000 | 1.000 | 0.000 | 0.000 | 0.000 | 0.726 | 0.000 | 1.000 | 0.999 | 1.000 | 0.000 |
| Chr_gene | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 0.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 0.996 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 0.997 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 0.000 | 1.000 | 0.000 | 1.000 | 0.000 | 0.000 | 1.000 | 0.000 | 0.000 | 0.000 | 1.000 | 1.000 | 0.000 | 0.000 | 1.000 | 1.000 | 0.000 | 1.000 | 0.525 | 0.000 | 0.000 | 1.000 | 1.000 | 1.000 | 0.000 | 0.000 | 0.000 | 1.000 | 0.000 | 1.000 | 0.999 | 0.265 | 0.000 |
| Consensus Whole ExomeSequence Avail_specimen_specimens | 0.144 | 0.144 | 0.000 | 0.000 | 0.000 | 0.000 | 0.231 | 0.999 | 0.685 | 0.893 | 0.021 | 0.019 | 0.819 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 0.000 | 1.000 | 0.816 | 1.000 | 1.000 | 0.116 | 0.099 | 1.000 | 0.000 | 0.816 | 0.816 | 1.000 | 0.916 | 1.000 | 0.999 | 1.000 | 1.000 | 0.999 | 1.000 | 1.000 | 1.000 | 1.000 | 0.916 | 1.000 | 1.000 | 1.000 | 1.000 | 0.999 | 1.000 | 1.000 | 0.999 | 0.074 | 1.000 | 0.000 | 1.000 | 1.000 | 1.000 | 0.000 | 0.000 | 0.999 | 0.414 | 1.000 | 0.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 |
| DiagnosisSubtype_df_pinfo_paciente_specimens | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 0.994 | 0.994 | 0.994 | 0.000 | 1.000 | 0.994 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 0.994 | 0.994 | 0.994 | 0.994 | 0.994 | 1.000 | 1.000 | 0.994 | 1.000 | 1.000 | 1.000 | 0.994 | 1.000 | 0.994 | 1.000 | 1.000 | 0.994 | 1.000 | 1.000 | 0.994 | 1.000 | 0.100 | 0.994 | 0.133 | 1.000 | 0.062 | 0.000 | 1.000 | 0.000 | 0.000 | 0.999 | 0.355 | 0.994 | 0.062 | 0.000 | 0.994 | 0.994 | 0.072 | 1.000 | 1.000 | 0.997 | 0.997 | 1.000 | 1.000 | 0.994 | 1.000 | 0.816 | 0.000 | 1.000 | 0.277 | 0.386 | 1.000 | 1.000 | 0.133 |
| DiagnosisSubtype_df_race_paciente_specimens | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 0.994 | 0.994 | 0.994 | 0.000 | 1.000 | 0.994 | 1.000 | 1.000 | 1.000 | 1.000 | 0.994 | 1.000 | 0.994 | 0.994 | 0.994 | 0.994 | 1.000 | 1.000 | 0.994 | 1.000 | 1.000 | 1.000 | 0.994 | 1.000 | 0.994 | 1.000 | 1.000 | 0.994 | 1.000 | 1.000 | 0.994 | 1.000 | 0.100 | 0.994 | 0.133 | 1.000 | 0.062 | 0.000 | 1.000 | 0.000 | 0.000 | 0.999 | 0.355 | 0.994 | 0.062 | 0.000 | 0.994 | 0.994 | 0.072 | 1.000 | 1.000 | 0.997 | 0.997 | 1.000 | 1.000 | 0.994 | 1.000 | 0.816 | 0.000 | 1.000 | 0.277 | 0.386 | 1.000 | 1.000 | 0.133 |
| DiagnosisSubtype_pathology | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 0.994 | 0.994 | 0.994 | 0.000 | 1.000 | 0.994 | 1.000 | 1.000 | 1.000 | 1.000 | 0.994 | 0.994 | 1.000 | 0.994 | 0.994 | 0.994 | 1.000 | 1.000 | 0.994 | 1.000 | 1.000 | 1.000 | 0.994 | 1.000 | 0.994 | 1.000 | 1.000 | 0.994 | 1.000 | 1.000 | 0.994 | 1.000 | 0.100 | 0.994 | 0.133 | 1.000 | 0.062 | 0.000 | 1.000 | 0.000 | 0.000 | 0.999 | 0.355 | 0.994 | 0.062 | 0.000 | 0.994 | 0.994 | 0.072 | 1.000 | 1.000 | 0.997 | 0.997 | 1.000 | 1.000 | 0.994 | 1.000 | 0.816 | 0.000 | 1.000 | 0.277 | 0.386 | 1.000 | 1.000 | 0.133 |
| DiagnosisSubtype_samples | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 0.994 | 0.994 | 0.994 | 0.000 | 1.000 | 0.994 | 1.000 | 1.000 | 1.000 | 1.000 | 0.994 | 0.994 | 0.994 | 1.000 | 0.994 | 0.994 | 1.000 | 1.000 | 0.994 | 1.000 | 1.000 | 1.000 | 0.994 | 1.000 | 0.994 | 1.000 | 1.000 | 0.994 | 1.000 | 1.000 | 0.994 | 1.000 | 0.100 | 0.994 | 0.133 | 1.000 | 0.062 | 0.000 | 1.000 | 0.000 | 0.000 | 0.999 | 0.355 | 0.994 | 0.062 | 0.000 | 0.994 | 0.994 | 0.072 | 1.000 | 1.000 | 0.997 | 0.997 | 1.000 | 1.000 | 0.994 | 1.000 | 0.816 | 0.000 | 1.000 | 0.277 | 0.386 | 1.000 | 1.000 | 0.133 |
| DiagnosisSubtype_specimen_specimens | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 0.994 | 0.994 | 0.994 | 0.000 | 1.000 | 0.994 | 1.000 | 1.000 | 1.000 | 1.000 | 0.994 | 0.994 | 0.994 | 0.994 | 1.000 | 0.994 | 1.000 | 1.000 | 0.994 | 1.000 | 1.000 | 1.000 | 0.994 | 1.000 | 0.994 | 1.000 | 1.000 | 0.994 | 1.000 | 1.000 | 0.994 | 1.000 | 0.100 | 0.994 | 0.133 | 1.000 | 0.062 | 0.000 | 1.000 | 0.000 | 0.000 | 0.999 | 0.355 | 0.994 | 0.062 | 0.000 | 0.994 | 0.994 | 0.072 | 1.000 | 1.000 | 0.997 | 0.997 | 1.000 | 1.000 | 0.994 | 1.000 | 0.816 | 0.000 | 1.000 | 0.277 | 0.386 | 1.000 | 1.000 | 0.133 |
| DiagnosisSubtype_trathistory_paciente_specimens | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 0.994 | 0.994 | 0.994 | 0.000 | 1.000 | 0.994 | 1.000 | 1.000 | 1.000 | 1.000 | 0.994 | 0.994 | 0.994 | 0.994 | 0.994 | 1.000 | 1.000 | 1.000 | 0.994 | 1.000 | 1.000 | 1.000 | 0.994 | 1.000 | 0.994 | 1.000 | 1.000 | 0.994 | 1.000 | 1.000 | 0.994 | 1.000 | 0.100 | 0.994 | 0.133 | 1.000 | 0.062 | 0.000 | 1.000 | 0.000 | 0.000 | 0.999 | 0.355 | 0.994 | 0.062 | 0.000 | 0.994 | 0.994 | 0.072 | 1.000 | 1.000 | 0.997 | 0.997 | 1.000 | 1.000 | 0.994 | 1.000 | 0.816 | 0.000 | 1.000 | 0.277 | 0.386 | 1.000 | 1.000 | 0.133 |
| Ethnicity_df_pinfo_paciente_specimens | 1.000 | 1.000 | 0.833 | 0.833 | 0.000 | 0.000 | 0.162 | 1.000 | 0.773 | 0.773 | 0.992 | 0.085 | 0.999 | 1.000 | 1.000 | 1.000 | 0.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 0.068 | 1.000 | 1.000 | 0.072 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 0.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 0.000 | 1.000 | 1.000 | 1.000 | 1.000 | 0.999 | 1.000 | 1.000 | 1.000 | 0.044 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 0.833 | 1.000 | 0.999 | 0.578 | 1.000 | 0.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 |
| Existing Variant_gene | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 0.000 | 1.000 | 1.000 | 0.996 | 0.996 | 0.996 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 0.996 | 0.996 | 1.000 | 1.000 | 0.996 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 0.996 | 0.000 | 1.000 | 0.000 | 0.996 | 0.000 | 0.000 | 1.000 | 0.000 | 0.000 | 0.000 | 1.000 | 1.000 | 0.000 | 0.000 | 1.000 | 1.000 | 0.000 | 1.000 | 0.642 | 0.000 | 0.000 | 1.000 | 1.000 | 1.000 | 0.000 | 0.000 | 0.000 | 0.999 | 0.000 | 1.000 | 1.000 | 1.000 | 0.000 |
| Grade StageInformation_df_pinfo_paciente_specimens | 0.509 | 0.509 | 0.068 | 0.068 | 0.622 | 0.622 | 0.705 | 1.000 | 0.784 | 0.955 | 0.406 | 0.597 | 0.868 | 1.000 | 1.000 | 1.000 | 0.816 | 0.994 | 0.994 | 0.994 | 0.994 | 0.994 | 0.994 | 0.068 | 1.000 | 1.000 | 1.000 | 1.000 | 0.666 | 0.490 | 1.000 | 0.465 | 0.534 | 0.534 | 0.662 | 0.816 | 1.000 | 1.000 | 1.000 | 0.316 | 0.999 | 0.112 | 1.000 | 0.018 | 0.000 | 0.816 | 0.335 | 0.338 | 0.960 | 0.155 | 0.999 | 0.018 | 0.000 | 1.000 | 0.999 | 0.089 | 0.421 | 1.000 | 0.970 | 0.968 | 0.068 | 0.421 | 0.999 | 0.590 | 0.490 | 0.026 | 1.000 | 0.428 | 0.556 | 1.000 | 1.000 | 0.112 |
| HGVS ProteinChange_gene | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 0.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 0.996 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 0.000 | 1.000 | 0.000 | 1.000 | 0.000 | 0.000 | 1.000 | 0.000 | 0.000 | 0.000 | 1.000 | 1.000 | 0.000 | 0.000 | 1.000 | 1.000 | 0.000 | 1.000 | 0.370 | 0.000 | 0.000 | 1.000 | 1.000 | 1.000 | 0.000 | 0.000 | 0.000 | 0.726 | 0.000 | 1.000 | 0.999 | 1.000 | 0.000 |
| HGVS cDNAChange_gene | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 0.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 0.996 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 0.000 | 1.000 | 0.000 | 1.000 | 0.000 | 0.000 | 1.000 | 0.000 | 0.000 | 0.000 | 1.000 | 1.000 | 0.000 | 0.000 | 1.000 | 1.000 | 0.000 | 1.000 | 0.370 | 0.000 | 0.000 | 1.000 | 1.000 | 1.000 | 0.000 | 0.000 | 0.000 | 0.726 | 0.000 | 1.000 | 0.999 | 1.000 | 0.000 |
| Has KnownMetastaticDisease_df_pinfo_paciente_specimens | 0.580 | 0.580 | 0.072 | 0.072 | 0.562 | 0.562 | 0.559 | 0.999 | 0.643 | 0.777 | 0.992 | 0.340 | 0.995 | 1.000 | 1.000 | 1.000 | 0.116 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 0.072 | 1.000 | 0.666 | 1.000 | 1.000 | 1.000 | 0.124 | 1.000 | 0.782 | 0.357 | 0.357 | 0.597 | 0.116 | 1.000 | 0.999 | 1.000 | 0.170 | 0.999 | 0.036 | 1.000 | 0.000 | 0.000 | 0.116 | 0.338 | 0.338 | 0.967 | 0.000 | 0.999 | 0.000 | 0.000 | 0.999 | 0.662 | 0.040 | 0.340 | 1.000 | 0.971 | 0.962 | 0.072 | 0.340 | 0.999 | 0.646 | 0.544 | 0.031 | 1.000 | 0.347 | 0.543 | 1.000 | 1.000 | 0.036 |
| Has Smoked100 Cigarettes_df_pinfo_paciente_specimens | 0.886 | 0.886 | 1.000 | 1.000 | 0.535 | 0.535 | 0.123 | 0.999 | 0.806 | 0.588 | 0.804 | 0.542 | 0.999 | 1.000 | 1.000 | 1.000 | 0.099 | 0.994 | 0.994 | 0.994 | 0.994 | 0.994 | 0.994 | 1.000 | 1.000 | 0.490 | 1.000 | 1.000 | 0.124 | 1.000 | 1.000 | 0.828 | 0.801 | 0.801 | 0.766 | 0.099 | 0.816 | 0.999 | 1.000 | 0.183 | 0.999 | 0.143 | 1.000 | 0.018 | 0.000 | 0.099 | 0.264 | 0.275 | 0.934 | 0.218 | 0.999 | 0.018 | 0.000 | 0.999 | 0.540 | 0.110 | 0.799 | 1.000 | 0.963 | 0.950 | 1.000 | 0.799 | 0.999 | 0.539 | 0.530 | 0.000 | 1.000 | 0.423 | 0.168 | 1.000 | 1.000 | 0.143 |
| HugoSymbol_gene | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 0.000 | 1.000 | 1.000 | 1.000 | 1.000 | 0.997 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 0.996 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 0.000 | 1.000 | 0.000 | 1.000 | 0.000 | 0.000 | 1.000 | 0.000 | 0.000 | 0.000 | 1.000 | 1.000 | 0.000 | 0.000 | 1.000 | 1.000 | 0.000 | 1.000 | 0.525 | 0.000 | 0.000 | 1.000 | 1.000 | 1.000 | 0.000 | 0.000 | 0.000 | 1.000 | 0.000 | 1.000 | 0.999 | 0.265 | 0.000 |
| Human PathogenTesting Summary_specimen_specimens | 0.580 | 0.580 | 1.000 | 1.000 | 0.067 | 0.067 | 0.131 | 0.999 | 0.729 | 0.729 | 0.992 | 0.146 | 0.995 | 1.000 | 1.000 | 1.000 | 0.000 | 0.994 | 0.994 | 0.994 | 0.994 | 0.994 | 0.994 | 1.000 | 1.000 | 0.465 | 1.000 | 1.000 | 0.782 | 0.828 | 1.000 | 1.000 | 0.580 | 0.580 | 0.647 | 0.000 | 1.000 | 0.999 | 1.000 | 0.112 | 0.999 | 0.116 | 1.000 | 0.056 | 0.000 | 0.000 | 0.167 | 0.166 | 0.937 | 0.372 | 0.999 | 0.056 | 0.000 | 0.999 | 0.627 | 0.060 | 0.710 | 1.000 | 0.975 | 0.942 | 1.000 | 0.710 | 0.999 | 0.664 | 0.384 | 0.000 | 1.000 | 0.357 | 0.200 | 1.000 | 1.000 | 0.116 |
| InferredAncestry_df_pinfo_paciente_specimens | 0.820 | 0.820 | 1.000 | 1.000 | 0.707 | 0.707 | 0.499 | 0.999 | 0.777 | 0.707 | 0.769 | 0.995 | 0.999 | 1.000 | 1.000 | 1.000 | 0.816 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 0.534 | 1.000 | 1.000 | 0.357 | 0.801 | 1.000 | 0.580 | 1.000 | 1.000 | 0.389 | 0.816 | 0.913 | 1.000 | 1.000 | 0.181 | 0.999 | 0.106 | 1.000 | 0.031 | 0.025 | 0.816 | 0.589 | 0.590 | 0.946 | 0.000 | 0.999 | 0.031 | 0.025 | 0.999 | 0.572 | 0.109 | 1.000 | 1.000 | 0.962 | 0.953 | 1.000 | 1.000 | 0.999 | 0.504 | 0.621 | 0.029 | 1.000 | 0.398 | 0.631 | 1.000 | 1.000 | 0.106 |
| InferredAncestry_df_race_paciente_specimens | 0.820 | 0.820 | 1.000 | 1.000 | 0.707 | 0.707 | 0.499 | 0.999 | 0.777 | 0.707 | 0.769 | 0.995 | 0.999 | 1.000 | 1.000 | 1.000 | 0.816 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 0.534 | 1.000 | 1.000 | 0.357 | 0.801 | 1.000 | 0.580 | 1.000 | 1.000 | 0.389 | 0.816 | 0.913 | 1.000 | 1.000 | 0.181 | 0.999 | 0.106 | 1.000 | 0.031 | 0.025 | 0.816 | 0.589 | 0.590 | 0.946 | 0.000 | 0.999 | 0.031 | 0.025 | 0.999 | 0.572 | 0.109 | 1.000 | 1.000 | 0.962 | 0.953 | 1.000 | 1.000 | 0.999 | 0.504 | 0.621 | 0.029 | 1.000 | 0.398 | 0.631 | 1.000 | 1.000 | 0.106 |
| Inflammatory Cell_pathology | 0.417 | 0.417 | 1.000 | 1.000 | 0.417 | 0.417 | 0.291 | 0.779 | 0.772 | 0.574 | 0.703 | 0.389 | 0.851 | 1.000 | 1.000 | 1.000 | 1.000 | 0.994 | 0.994 | 0.994 | 0.994 | 0.994 | 0.994 | 1.000 | 1.000 | 0.662 | 1.000 | 1.000 | 0.597 | 0.766 | 1.000 | 0.647 | 0.389 | 0.389 | 1.000 | 1.000 | 1.000 | 0.760 | 1.000 | 0.301 | 0.851 | 0.095 | 1.000 | 0.084 | 0.000 | 1.000 | 0.210 | 0.202 | 0.876 | 0.173 | 0.851 | 0.084 | 0.000 | 0.760 | 0.886 | 0.068 | 0.389 | 1.000 | 0.982 | 0.817 | 1.000 | 0.389 | 0.851 | 0.657 | 0.491 | 0.000 | 1.000 | 0.433 | 0.185 | 1.000 | 1.000 | 0.095 |
| MSI Status_specimen_specimens | 0.144 | 0.144 | 0.000 | 0.000 | 0.000 | 0.000 | 0.231 | 0.999 | 0.685 | 0.893 | 0.021 | 0.019 | 0.819 | 1.000 | 1.000 | 1.000 | 0.916 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 0.000 | 1.000 | 0.816 | 1.000 | 1.000 | 0.116 | 0.099 | 1.000 | 0.000 | 0.816 | 0.816 | 1.000 | 1.000 | 1.000 | 0.999 | 1.000 | 1.000 | 0.999 | 1.000 | 1.000 | 1.000 | 1.000 | 0.916 | 1.000 | 1.000 | 1.000 | 1.000 | 0.999 | 1.000 | 1.000 | 0.999 | 0.074 | 1.000 | 0.000 | 1.000 | 1.000 | 1.000 | 0.000 | 0.000 | 0.999 | 0.414 | 1.000 | 0.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 |
| ModelNotes_specimen_specimens | 0.993 | 0.993 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 0.706 | 1.000 | 0.000 | 0.993 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 0.816 | 1.000 | 1.000 | 0.913 | 0.913 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 0.113 | 1.000 | 0.071 | 1.000 | 0.027 | 0.027 | 1.000 | 0.656 | 0.656 | 0.998 | 1.000 | 1.000 | 0.027 | 0.027 | 1.000 | 1.000 | 0.071 | 1.000 | 1.000 | 0.997 | 0.997 | 1.000 | 1.000 | 1.000 | 0.662 | 0.910 | 0.065 | 1.000 | 0.175 | 1.000 | 1.000 | 1.000 | 0.071 |
| Molecular andIHC Data_df_pinfo_paciente_specimens | 0.999 | 0.999 | 1.000 | 1.000 | 0.999 | 0.999 | 1.000 | 1.000 | 1.000 | 1.000 | 0.996 | 0.999 | 1.000 | 1.000 | 1.000 | 1.000 | 0.999 | 0.994 | 0.994 | 0.994 | 0.994 | 0.994 | 0.994 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 0.999 | 0.999 | 1.000 | 0.999 | 1.000 | 1.000 | 0.760 | 0.999 | 1.000 | 1.000 | 1.000 | 0.383 | 1.000 | 0.152 | 1.000 | 0.099 | 0.075 | 0.999 | 0.380 | 0.380 | 0.962 | 0.371 | 1.000 | 0.099 | 0.075 | 1.000 | 0.999 | 0.107 | 0.999 | 1.000 | 0.995 | 0.969 | 1.000 | 0.999 | 1.000 | 0.717 | 0.559 | 0.056 | 1.000 | 0.374 | 0.613 | 1.000 | 1.000 | 0.152 |
| MutationEffect_gene | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 0.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 0.996 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 0.000 | 1.000 | 0.000 | 1.000 | 0.000 | 0.000 | 1.000 | 0.000 | 0.000 | 0.000 | 1.000 | 1.000 | 0.000 | 0.000 | 1.000 | 1.000 | 0.000 | 1.000 | 0.370 | 0.000 | 0.000 | 1.000 | 1.000 | 1.000 | 0.000 | 0.000 | 0.000 | 0.726 | 0.000 | 1.000 | 0.999 | 1.000 | 0.000 |
| Necrosis_pathology | 0.162 | 0.162 | 1.000 | 1.000 | 0.162 | 0.162 | 0.401 | 0.354 | 0.362 | 0.297 | 0.221 | 0.181 | 0.317 | 0.000 | 0.000 | 0.000 | 1.000 | 0.100 | 0.100 | 0.100 | 0.100 | 0.100 | 0.100 | 1.000 | 0.000 | 0.316 | 0.000 | 0.000 | 0.170 | 0.183 | 0.000 | 0.112 | 0.181 | 0.181 | 0.301 | 1.000 | 0.113 | 0.383 | 0.000 | 1.000 | 0.317 | 0.000 | 0.000 | 0.891 | 0.000 | 1.000 | 0.517 | 0.036 | 0.834 | 0.000 | 0.317 | 0.891 | 0.000 | 0.383 | 0.354 | 0.000 | 0.181 | 0.000 | 0.993 | 0.293 | 1.000 | 0.181 | 0.317 | 0.224 | 0.271 | 0.000 | 0.000 | 0.775 | 0.231 | 0.000 | 0.000 | 0.000 |
| Occupation_df_pinfo_paciente_specimens | 0.999 | 0.999 | 1.000 | 1.000 | 0.999 | 0.999 | 0.999 | 1.000 | 0.999 | 0.999 | 0.704 | 0.999 | 1.000 | 1.000 | 1.000 | 1.000 | 0.999 | 0.994 | 0.994 | 0.994 | 0.994 | 0.994 | 0.994 | 1.000 | 1.000 | 0.999 | 1.000 | 1.000 | 0.999 | 0.999 | 1.000 | 0.999 | 0.999 | 0.999 | 0.851 | 0.999 | 1.000 | 1.000 | 1.000 | 0.317 | 1.000 | 0.167 | 1.000 | 0.090 | 0.067 | 0.999 | 0.354 | 0.354 | 0.937 | 0.371 | 1.000 | 0.090 | 0.067 | 1.000 | 0.999 | 0.133 | 0.999 | 1.000 | 0.966 | 0.952 | 1.000 | 0.999 | 1.000 | 0.713 | 0.454 | 0.036 | 1.000 | 0.394 | 0.613 | 1.000 | 1.000 | 0.167 |
| OncoKB Cancer GenePanel Data Avail_samples | 0.107 | 0.107 | 1.000 | 1.000 | 0.107 | 0.107 | 0.074 | 0.166 | 0.120 | 0.068 | 0.017 | 0.106 | 0.167 | 0.000 | 0.000 | 0.000 | 1.000 | 0.133 | 0.133 | 0.133 | 0.133 | 0.133 | 0.133 | 1.000 | 0.000 | 0.112 | 0.000 | 0.000 | 0.036 | 0.143 | 0.000 | 0.116 | 0.106 | 0.106 | 0.095 | 1.000 | 0.071 | 0.152 | 0.000 | 0.000 | 0.167 | 1.000 | 0.000 | 0.000 | 0.404 | 1.000 | 0.051 | 0.290 | 0.135 | 0.033 | 0.167 | 0.000 | 0.404 | 0.152 | 0.100 | 0.989 | 0.106 | 0.000 | 0.115 | 0.981 | 1.000 | 0.106 | 0.167 | 0.072 | 0.106 | 0.000 | 0.000 | 0.040 | 0.051 | 0.000 | 0.000 | 0.999 |
| Oncogenicity_gene | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 0.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 0.996 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 0.000 | 1.000 | 0.000 | 1.000 | 0.000 | 0.000 | 1.000 | 0.000 | 0.000 | 0.000 | 1.000 | 1.000 | 0.000 | 0.000 | 1.000 | 1.000 | 0.000 | 1.000 | 0.370 | 0.000 | 0.000 | 1.000 | 1.000 | 1.000 | 0.000 | 0.000 | 0.000 | 0.726 | 0.000 | 1.000 | 0.999 | 1.000 | 0.000 |
| PDM Type_pathology | 0.034 | 0.034 | 1.000 | 1.000 | 0.034 | 0.034 | 0.071 | 0.091 | 0.073 | 0.035 | 0.109 | 0.031 | 0.090 | 0.000 | 0.000 | 0.000 | 1.000 | 0.062 | 0.062 | 0.062 | 0.062 | 0.062 | 0.062 | 1.000 | 0.000 | 0.018 | 0.000 | 0.000 | 0.000 | 0.018 | 0.000 | 0.056 | 0.031 | 0.031 | 0.084 | 1.000 | 0.027 | 0.099 | 0.000 | 0.891 | 0.090 | 0.000 | 0.000 | 1.000 | 0.000 | 1.000 | 1.000 | 0.000 | 0.548 | 0.000 | 0.090 | 0.998 | 0.000 | 0.099 | 0.024 | 0.000 | 0.031 | 0.000 | 0.992 | 0.000 | 1.000 | 0.031 | 0.090 | 0.034 | 0.400 | 0.000 | 0.000 | 0.892 | 0.068 | 0.000 | 0.000 | 0.000 |
| PDM Type_samples | 0.028 | 0.028 | 1.000 | 1.000 | 0.028 | 0.028 | 0.071 | 0.066 | 0.060 | 0.000 | 0.109 | 0.025 | 0.067 | 0.000 | 0.000 | 0.000 | 1.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 1.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.025 | 0.025 | 0.000 | 1.000 | 0.027 | 0.075 | 0.000 | 0.000 | 0.067 | 0.404 | 0.000 | 0.000 | 1.000 | 1.000 | 0.000 | 1.000 | 0.000 | 0.179 | 0.067 | 0.000 | 0.998 | 0.075 | 0.000 | 0.399 | 0.025 | 0.000 | 0.000 | 0.992 | 1.000 | 0.025 | 0.067 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.014 | 0.000 | 0.000 | 0.404 |
| PDX GrowthCurve Avail_specimen_specimens | 0.144 | 0.144 | 0.000 | 0.000 | 0.000 | 0.000 | 0.231 | 0.999 | 0.685 | 0.893 | 0.021 | 0.019 | 0.819 | 1.000 | 1.000 | 1.000 | 0.916 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 0.000 | 1.000 | 0.816 | 1.000 | 1.000 | 0.116 | 0.099 | 1.000 | 0.000 | 0.816 | 0.816 | 1.000 | 0.916 | 1.000 | 0.999 | 1.000 | 1.000 | 0.999 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 0.999 | 1.000 | 1.000 | 0.999 | 0.074 | 1.000 | 0.000 | 1.000 | 1.000 | 1.000 | 0.000 | 0.000 | 0.999 | 0.414 | 1.000 | 0.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 |
| Passage_pathology | 0.468 | 0.468 | 1.000 | 1.000 | 0.468 | 0.468 | 0.387 | 0.332 | 0.243 | 0.274 | 0.343 | 0.589 | 0.354 | 0.000 | 0.000 | 0.000 | 1.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 1.000 | 0.000 | 0.335 | 0.000 | 0.000 | 0.338 | 0.264 | 0.000 | 0.167 | 0.589 | 0.589 | 0.210 | 1.000 | 0.656 | 0.380 | 0.000 | 0.517 | 0.354 | 0.051 | 0.000 | 1.000 | 0.000 | 1.000 | 1.000 | 0.193 | 0.829 | 0.000 | 0.354 | 1.000 | 0.000 | 0.380 | 0.374 | 0.053 | 0.589 | 0.000 | 0.992 | 0.314 | 1.000 | 0.589 | 0.354 | 0.159 | 0.472 | 0.000 | 0.000 | 0.473 | 0.320 | 0.000 | 0.000 | 0.051 |
| Passage_samples | 0.468 | 0.468 | 1.000 | 1.000 | 0.468 | 0.468 | 0.387 | 0.332 | 0.245 | 0.276 | 0.343 | 0.590 | 0.354 | 0.000 | 0.000 | 0.000 | 1.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 1.000 | 0.000 | 0.338 | 0.000 | 0.000 | 0.338 | 0.275 | 0.000 | 0.166 | 0.590 | 0.590 | 0.202 | 1.000 | 0.656 | 0.380 | 0.000 | 0.036 | 0.354 | 0.290 | 0.000 | 0.000 | 1.000 | 1.000 | 0.193 | 1.000 | 0.334 | 1.000 | 0.354 | 0.000 | 1.000 | 0.380 | 0.378 | 0.289 | 0.590 | 0.000 | 0.317 | 0.992 | 1.000 | 0.590 | 0.354 | 0.161 | 0.201 | 0.000 | 0.000 | 0.117 | 0.297 | 0.000 | 0.000 | 0.290 |
| Pathology Notes_pathology | 0.952 | 0.952 | 1.000 | 1.000 | 0.952 | 0.952 | 0.943 | 0.918 | 0.920 | 0.950 | 0.663 | 0.946 | 0.937 | 0.000 | 0.000 | 0.000 | 1.000 | 0.999 | 0.999 | 0.999 | 0.999 | 0.999 | 0.999 | 1.000 | 0.000 | 0.960 | 0.000 | 0.000 | 0.967 | 0.934 | 0.000 | 0.937 | 0.946 | 0.946 | 0.876 | 1.000 | 0.998 | 0.962 | 0.000 | 0.834 | 0.937 | 0.135 | 0.000 | 0.548 | 0.000 | 1.000 | 0.829 | 0.334 | 1.000 | 0.334 | 0.937 | 0.548 | 0.000 | 0.962 | 0.997 | 0.098 | 0.946 | 0.000 | 0.975 | 0.434 | 1.000 | 0.946 | 0.937 | 0.681 | 0.788 | 0.000 | 0.000 | 0.764 | 0.801 | 0.000 | 0.000 | 0.135 |
| PathologyAvail_samples | 0.000 | 0.000 | 1.000 | 1.000 | 0.000 | 0.000 | 0.000 | 0.371 | 0.192 | 0.193 | 1.000 | 0.000 | 0.371 | 1.000 | 1.000 | 1.000 | 1.000 | 0.355 | 0.355 | 0.355 | 0.355 | 0.355 | 0.355 | 1.000 | 1.000 | 0.155 | 1.000 | 1.000 | 0.000 | 0.218 | 1.000 | 0.372 | 0.000 | 0.000 | 0.173 | 1.000 | 1.000 | 0.371 | 1.000 | 0.000 | 0.371 | 0.033 | 1.000 | 0.000 | 0.179 | 1.000 | 0.000 | 1.000 | 0.334 | 1.000 | 0.371 | 0.000 | 0.179 | 0.371 | 0.115 | 0.034 | 0.000 | 1.000 | 0.351 | 0.403 | 1.000 | 0.000 | 0.371 | 0.192 | 0.140 | 0.000 | 1.000 | 0.064 | 0.098 | 1.000 | 1.000 | 0.033 |
| Patient ID | 0.999 | 0.999 | 0.999 | 0.999 | 0.999 | 0.999 | 0.999 | 1.000 | -0.648 | 0.060 | 0.702 | 0.999 | 1.000 | 1.000 | 1.000 | 1.000 | 0.999 | 0.994 | 0.994 | 0.994 | 0.994 | 0.994 | 0.994 | 0.999 | 1.000 | 0.999 | 1.000 | 1.000 | 0.999 | 0.999 | 1.000 | 0.999 | 0.999 | 0.999 | 0.851 | 0.999 | 1.000 | 1.000 | 1.000 | 0.317 | 1.000 | 0.167 | 1.000 | 0.090 | 0.067 | 0.999 | 0.354 | 0.354 | 0.937 | 0.371 | 1.000 | 0.090 | 0.067 | 1.000 | 0.999 | 0.133 | 0.999 | 1.000 | 0.966 | 0.952 | 0.999 | 0.999 | 1.000 | 0.687 | -0.070 | 0.032 | NaN | -0.014 | 0.613 | NaN | 1.000 | 0.167 |
| Patient/OriginatingSpecimen_pathology | 0.034 | 0.034 | 1.000 | 1.000 | 0.034 | 0.034 | 0.071 | 0.091 | 0.073 | 0.035 | 0.109 | 0.031 | 0.090 | 0.000 | 0.000 | 0.000 | 1.000 | 0.062 | 0.062 | 0.062 | 0.062 | 0.062 | 0.062 | 1.000 | 0.000 | 0.018 | 0.000 | 0.000 | 0.000 | 0.018 | 0.000 | 0.056 | 0.031 | 0.031 | 0.084 | 1.000 | 0.027 | 0.099 | 0.000 | 0.891 | 0.090 | 0.000 | 0.000 | 0.998 | 0.000 | 1.000 | 1.000 | 0.000 | 0.548 | 0.000 | 0.090 | 1.000 | 0.000 | 0.099 | 0.024 | 0.000 | 0.031 | 0.000 | 0.992 | 0.000 | 1.000 | 0.031 | 0.090 | 0.034 | 0.400 | 0.000 | 0.000 | 0.892 | 0.068 | 0.000 | 0.000 | 0.000 |
| Patient/OriginatingSpecimen_samples | 0.028 | 0.028 | 1.000 | 1.000 | 0.028 | 0.028 | 0.071 | 0.066 | 0.060 | 0.000 | 0.109 | 0.025 | 0.067 | 0.000 | 0.000 | 0.000 | 1.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 1.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.025 | 0.025 | 0.000 | 1.000 | 0.027 | 0.075 | 0.000 | 0.000 | 0.067 | 0.404 | 0.000 | 0.000 | 0.998 | 1.000 | 0.000 | 1.000 | 0.000 | 0.179 | 0.067 | 0.000 | 1.000 | 0.075 | 0.000 | 0.399 | 0.025 | 0.000 | 0.000 | 0.992 | 1.000 | 0.025 | 0.067 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.014 | 0.000 | 0.000 | 0.404 |
| PatientNotes_df_pinfo_paciente_specimens | 0.999 | 0.999 | 1.000 | 1.000 | 0.999 | 0.999 | 0.999 | 1.000 | 1.000 | 1.000 | 0.706 | 0.999 | 1.000 | 1.000 | 1.000 | 1.000 | 0.999 | 0.994 | 0.994 | 0.994 | 0.994 | 0.994 | 0.994 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 0.999 | 0.999 | 1.000 | 0.999 | 0.999 | 0.999 | 0.760 | 0.999 | 1.000 | 1.000 | 1.000 | 0.383 | 1.000 | 0.152 | 1.000 | 0.099 | 0.075 | 0.999 | 0.380 | 0.380 | 0.962 | 0.371 | 1.000 | 0.099 | 0.075 | 1.000 | 0.999 | 0.107 | 0.999 | 1.000 | 0.995 | 0.969 | 1.000 | 0.999 | 1.000 | 0.714 | 0.559 | 0.048 | 1.000 | 0.374 | 0.613 | 1.000 | 1.000 | 0.152 |
| ProvidedTissue Origin_specimen_specimens | 0.572 | 0.572 | 0.044 | 0.044 | 0.563 | 0.563 | 0.535 | 0.999 | 0.886 | 0.865 | 1.000 | 0.568 | 0.999 | 1.000 | 1.000 | 1.000 | 0.074 | 0.994 | 0.994 | 0.994 | 0.994 | 0.994 | 0.994 | 0.044 | 1.000 | 0.999 | 1.000 | 1.000 | 0.662 | 0.540 | 1.000 | 0.627 | 0.572 | 0.572 | 0.886 | 0.074 | 1.000 | 0.999 | 1.000 | 0.354 | 0.999 | 0.100 | 1.000 | 0.024 | 0.000 | 0.074 | 0.374 | 0.378 | 0.997 | 0.115 | 0.999 | 0.024 | 0.000 | 0.999 | 1.000 | 0.082 | 0.567 | 1.000 | 0.992 | 0.992 | 0.044 | 0.567 | 0.999 | 0.786 | 0.660 | 0.014 | 1.000 | 0.462 | 0.444 | 1.000 | 1.000 | 0.100 |
| RNASeqAvail_samples | 0.109 | 0.109 | 1.000 | 1.000 | 0.109 | 0.109 | 0.074 | 0.126 | 0.106 | 0.038 | 0.017 | 0.109 | 0.133 | 0.000 | 0.000 | 0.000 | 1.000 | 0.072 | 0.072 | 0.072 | 0.072 | 0.072 | 0.072 | 1.000 | 0.000 | 0.089 | 0.000 | 0.000 | 0.040 | 0.110 | 0.000 | 0.060 | 0.109 | 0.109 | 0.068 | 1.000 | 0.071 | 0.107 | 0.000 | 0.000 | 0.133 | 0.989 | 0.000 | 0.000 | 0.399 | 1.000 | 0.053 | 0.289 | 0.098 | 0.034 | 0.133 | 0.000 | 0.399 | 0.107 | 0.082 | 1.000 | 0.109 | 0.000 | 0.058 | 0.981 | 1.000 | 0.109 | 0.133 | 0.044 | 0.085 | 0.000 | 0.000 | 0.032 | 0.049 | 0.000 | 0.000 | 0.989 |
| Race_df_pinfo_paciente_specimens | 0.995 | 0.995 | 1.000 | 1.000 | 0.707 | 0.707 | 0.481 | 0.999 | 0.745 | 0.632 | 0.769 | 0.995 | 0.999 | 1.000 | 1.000 | 1.000 | 0.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 0.421 | 1.000 | 1.000 | 0.340 | 0.799 | 1.000 | 0.710 | 1.000 | 1.000 | 0.389 | 0.000 | 1.000 | 0.999 | 1.000 | 0.181 | 0.999 | 0.106 | 1.000 | 0.031 | 0.025 | 0.000 | 0.589 | 0.590 | 0.946 | 0.000 | 0.999 | 0.031 | 0.025 | 0.999 | 0.567 | 0.109 | 1.000 | 1.000 | 0.962 | 0.953 | 1.000 | 1.000 | 0.999 | 0.505 | 0.621 | 0.035 | 1.000 | 0.398 | 0.631 | 1.000 | 1.000 | 0.106 |
| Sample ID_gene | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 0.000 | 1.000 | 1.000 | 0.370 | 0.370 | 0.525 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 0.642 | 1.000 | 0.370 | 0.370 | 1.000 | 1.000 | 0.525 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 0.370 | 0.000 | 1.000 | 0.000 | 0.370 | 0.000 | 0.000 | 1.000 | 0.000 | 0.000 | 0.000 | 1.000 | 1.000 | 0.000 | 0.000 | 1.000 | 1.000 | 0.000 | 1.000 | 1.000 | 0.000 | 0.000 | 1.000 | 1.000 | 1.000 | 0.000 | 0.000 | 0.000 | 0.763 | 0.000 | 1.000 | 0.576 | 0.132 | 0.000 |
| Sample ID_pathology | 0.940 | 0.940 | 1.000 | 1.000 | 0.940 | 0.940 | 0.963 | 0.995 | 0.969 | 0.965 | 0.588 | 0.962 | 0.966 | 0.000 | 0.000 | 0.000 | 1.000 | 0.997 | 0.997 | 0.997 | 0.997 | 0.997 | 0.997 | 1.000 | 0.000 | 0.970 | 0.000 | 0.000 | 0.971 | 0.963 | 0.000 | 0.975 | 0.962 | 0.962 | 0.982 | 1.000 | 0.997 | 0.995 | 0.000 | 0.993 | 0.966 | 0.115 | 0.000 | 0.992 | 0.000 | 1.000 | 0.992 | 0.317 | 0.975 | 0.351 | 0.966 | 0.992 | 0.000 | 0.995 | 0.992 | 0.058 | 0.962 | 0.000 | 1.000 | 0.295 | 1.000 | 0.962 | 0.966 | 0.688 | 0.993 | 0.000 | 0.000 | 0.991 | 0.969 | 0.000 | 0.000 | 0.115 |
| Sample ID_samples | 0.935 | 0.935 | 1.000 | 1.000 | 0.935 | 0.935 | 0.960 | 0.972 | 0.966 | 0.960 | 0.588 | 0.953 | 0.952 | 0.000 | 0.000 | 0.000 | 1.000 | 0.997 | 0.997 | 0.997 | 0.997 | 0.997 | 0.997 | 1.000 | 0.000 | 0.968 | 0.000 | 0.000 | 0.962 | 0.950 | 0.000 | 0.942 | 0.953 | 0.953 | 0.817 | 1.000 | 0.997 | 0.969 | 0.000 | 0.293 | 0.952 | 0.981 | 0.000 | 0.000 | 0.992 | 1.000 | 0.314 | 0.992 | 0.434 | 0.403 | 0.952 | 0.000 | 0.992 | 0.969 | 0.992 | 0.981 | 0.953 | 0.000 | 0.295 | 1.000 | 1.000 | 0.953 | 0.952 | 0.684 | 0.384 | 0.000 | 0.000 | 0.301 | 0.565 | 0.000 | 0.000 | 0.981 |
| Self-ReportedEthnicity_df_race_paciente_specimens | 1.000 | 1.000 | 0.833 | 0.833 | 0.000 | 0.000 | 0.162 | 1.000 | 0.773 | 0.773 | 0.992 | 0.085 | 0.999 | 1.000 | 1.000 | 1.000 | 0.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 0.833 | 1.000 | 0.068 | 1.000 | 1.000 | 0.072 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 0.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 0.000 | 1.000 | 1.000 | 1.000 | 1.000 | 0.999 | 1.000 | 1.000 | 1.000 | 0.044 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 0.999 | 0.578 | 1.000 | 0.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 |
| Self-ReportedRace_df_race_paciente_specimens | 0.995 | 0.995 | 1.000 | 1.000 | 0.707 | 0.707 | 0.481 | 0.999 | 0.745 | 0.632 | 0.769 | 0.995 | 0.999 | 1.000 | 1.000 | 1.000 | 0.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 0.421 | 1.000 | 1.000 | 0.340 | 0.799 | 1.000 | 0.710 | 1.000 | 1.000 | 0.389 | 0.000 | 1.000 | 0.999 | 1.000 | 0.181 | 0.999 | 0.106 | 1.000 | 0.031 | 0.025 | 0.000 | 0.589 | 0.590 | 0.946 | 0.000 | 0.999 | 0.031 | 0.025 | 0.999 | 0.567 | 0.109 | 1.000 | 1.000 | 0.962 | 0.953 | 1.000 | 1.000 | 0.999 | 0.505 | 0.621 | 0.035 | 1.000 | 0.398 | 0.631 | 1.000 | 1.000 | 0.106 |
| Specimen ID | 0.999 | 0.999 | 0.999 | 0.999 | 0.999 | 0.999 | 0.999 | 1.000 | 0.999 | 0.999 | 0.702 | 0.999 | 1.000 | 1.000 | 1.000 | 1.000 | 0.999 | 0.994 | 0.994 | 0.994 | 0.994 | 0.994 | 0.994 | 0.999 | 1.000 | 0.999 | 1.000 | 1.000 | 0.999 | 0.999 | 1.000 | 0.999 | 0.999 | 0.999 | 0.851 | 0.999 | 1.000 | 1.000 | 1.000 | 0.317 | 1.000 | 0.167 | 1.000 | 0.090 | 0.067 | 0.999 | 0.354 | 0.354 | 0.937 | 0.371 | 1.000 | 0.090 | 0.067 | 1.000 | 0.999 | 0.133 | 0.999 | 1.000 | 0.966 | 0.952 | 0.999 | 0.999 | 1.000 | 0.687 | 0.454 | 0.032 | 1.000 | 0.394 | 0.613 | 1.000 | 1.000 | 0.167 |
| StandardizedRegimen_trathistory_paciente_specimens | 0.466 | 0.466 | 0.578 | 0.578 | 0.394 | 0.394 | 0.367 | 0.706 | 0.661 | 0.603 | 0.995 | 0.430 | 0.686 | 0.000 | 0.000 | 0.000 | 0.414 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 0.578 | 0.000 | 0.590 | 0.000 | 0.000 | 0.646 | 0.539 | 0.000 | 0.664 | 0.504 | 0.504 | 0.657 | 0.414 | 0.662 | 0.717 | 0.000 | 0.224 | 0.713 | 0.072 | 0.000 | 0.034 | 0.000 | 0.414 | 0.159 | 0.161 | 0.681 | 0.192 | 0.687 | 0.034 | 0.000 | 0.714 | 0.786 | 0.044 | 0.505 | 0.000 | 0.688 | 0.684 | 0.578 | 0.505 | 0.687 | 1.000 | 0.316 | 0.918 | 0.000 | 0.340 | 0.168 | 0.000 | 0.000 | 0.072 |
| Stromal_pathology | 0.549 | 0.549 | 1.000 | 1.000 | 0.549 | 0.549 | 0.449 | 0.558 | 0.201 | -0.054 | 0.480 | 0.621 | 0.454 | 0.000 | 0.000 | 0.000 | 1.000 | 0.816 | 0.816 | 0.816 | 0.816 | 0.816 | 0.816 | 1.000 | 0.000 | 0.490 | 0.000 | 0.000 | 0.544 | 0.530 | 0.000 | 0.384 | 0.621 | 0.621 | 0.491 | 1.000 | 0.910 | 0.559 | 0.000 | 0.271 | 0.454 | 0.106 | 0.000 | 0.400 | 0.000 | 1.000 | 0.472 | 0.201 | 0.788 | 0.140 | -0.070 | 0.400 | 0.000 | 0.559 | 0.660 | 0.085 | 0.621 | 0.000 | 0.993 | 0.384 | 1.000 | 0.621 | 0.454 | 0.316 | 1.000 | 0.000 | 0.000 | -0.669 | 0.327 | 0.000 | 0.000 | 0.106 |
| Timing_trathistory_paciente_specimens | 0.055 | 0.055 | 0.000 | 0.000 | 0.059 | 0.059 | 0.059 | 0.000 | 0.000 | 0.019 | 0.992 | 0.038 | 0.037 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.026 | 0.000 | 0.000 | 0.031 | 0.000 | 0.000 | 0.000 | 0.029 | 0.029 | 0.000 | 0.000 | 0.065 | 0.056 | 0.000 | 0.000 | 0.036 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.032 | 0.000 | 0.000 | 0.048 | 0.014 | 0.000 | 0.035 | 0.000 | 0.000 | 0.000 | 0.000 | 0.035 | 0.032 | 0.918 | 0.000 | 1.000 | 0.000 | 0.000 | 0.053 | 0.000 | 0.000 | 0.000 |
| Total Reads_gene | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | NaN | NaN | 0.000 | 1.000 | 1.000 | 0.726 | 0.726 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 0.999 | 1.000 | 0.726 | 0.726 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 0.726 | 0.000 | 1.000 | 0.000 | 0.726 | 0.000 | 0.000 | 1.000 | 0.000 | 0.000 | 0.000 | 1.000 | NaN | 0.000 | 0.000 | 1.000 | 1.000 | 0.000 | 1.000 | 0.763 | 0.000 | 0.000 | 1.000 | 1.000 | 1.000 | 0.000 | 0.000 | 0.000 | 1.000 | 0.000 | 1.000 | 0.327 | 0.349 | 0.000 |
| Tumor Content_pathology | 0.378 | 0.378 | 1.000 | 1.000 | 0.378 | 0.378 | 0.363 | 0.462 | -0.103 | 0.095 | 0.420 | 0.398 | 0.394 | 0.000 | 0.000 | 0.000 | 1.000 | 0.277 | 0.277 | 0.277 | 0.277 | 0.277 | 0.277 | 1.000 | 0.000 | 0.428 | 0.000 | 0.000 | 0.347 | 0.423 | 0.000 | 0.357 | 0.398 | 0.398 | 0.433 | 1.000 | 0.175 | 0.374 | 0.000 | 0.775 | 0.394 | 0.040 | 0.000 | 0.892 | 0.000 | 1.000 | 0.473 | 0.117 | 0.764 | 0.064 | -0.014 | 0.892 | 0.000 | 0.374 | 0.462 | 0.032 | 0.398 | 0.000 | 0.991 | 0.301 | 1.000 | 0.398 | 0.394 | 0.340 | -0.669 | 0.000 | 0.000 | 1.000 | 0.152 | 0.000 | 0.000 | 0.040 |
| Tumor Grade_pathology | 0.679 | 0.679 | 1.000 | 1.000 | 0.679 | 0.679 | 0.724 | 0.376 | 0.222 | 0.559 | 0.662 | 0.631 | 0.613 | 1.000 | 1.000 | 1.000 | 1.000 | 0.386 | 0.386 | 0.386 | 0.386 | 0.386 | 0.386 | 1.000 | 1.000 | 0.556 | 1.000 | 1.000 | 0.543 | 0.168 | 1.000 | 0.200 | 0.631 | 0.631 | 0.185 | 1.000 | 1.000 | 0.613 | 1.000 | 0.231 | 0.613 | 0.051 | 1.000 | 0.068 | 0.014 | 1.000 | 0.320 | 0.297 | 0.801 | 0.098 | 0.613 | 0.068 | 0.014 | 0.613 | 0.444 | 0.049 | 0.631 | 1.000 | 0.969 | 0.565 | 1.000 | 0.631 | 0.613 | 0.168 | 0.327 | 0.053 | 1.000 | 0.152 | 1.000 | 1.000 | 1.000 | 0.051 |
| Variant AlleleFrequency_gene | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | NaN | NaN | 0.000 | 1.000 | 1.000 | 0.999 | 0.999 | 0.999 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 0.999 | 0.999 | 1.000 | 1.000 | 0.999 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 0.999 | 0.000 | 1.000 | 0.000 | 0.999 | 0.000 | 0.000 | 1.000 | 0.000 | 0.000 | 0.000 | 1.000 | NaN | 0.000 | 0.000 | 1.000 | 1.000 | 0.000 | 1.000 | 0.576 | 0.000 | 0.000 | 1.000 | 1.000 | 1.000 | 0.000 | 0.000 | 0.000 | 0.327 | 0.000 | 1.000 | 1.000 | 0.999 | 0.000 |
| VariantClass_gene | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 0.000 | 1.000 | 1.000 | 1.000 | 1.000 | 0.265 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 0.265 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 0.000 | 1.000 | 0.000 | 1.000 | 0.000 | 0.000 | 1.000 | 0.000 | 0.000 | 0.000 | 1.000 | 1.000 | 0.000 | 0.000 | 1.000 | 1.000 | 0.000 | 1.000 | 0.132 | 0.000 | 0.000 | 1.000 | 1.000 | 1.000 | 0.000 | 0.000 | 0.000 | 0.349 | 0.000 | 1.000 | 0.999 | 1.000 | 0.000 |
| Whole ExomeSequence Avail_samples | 0.107 | 0.107 | 1.000 | 1.000 | 0.107 | 0.107 | 0.074 | 0.166 | 0.120 | 0.068 | 0.017 | 0.106 | 0.167 | 0.000 | 0.000 | 0.000 | 1.000 | 0.133 | 0.133 | 0.133 | 0.133 | 0.133 | 0.133 | 1.000 | 0.000 | 0.112 | 0.000 | 0.000 | 0.036 | 0.143 | 0.000 | 0.116 | 0.106 | 0.106 | 0.095 | 1.000 | 0.071 | 0.152 | 0.000 | 0.000 | 0.167 | 0.999 | 0.000 | 0.000 | 0.404 | 1.000 | 0.051 | 0.290 | 0.135 | 0.033 | 0.167 | 0.000 | 0.404 | 0.152 | 0.100 | 0.989 | 0.106 | 0.000 | 0.115 | 0.981 | 1.000 | 0.106 | 0.167 | 0.072 | 0.106 | 0.000 | 0.000 | 0.040 | 0.051 | 0.000 | 0.000 | 1.000 |
Missing values
Sample
| Patient ID | DiagnosisSubtype_trathistory_paciente_specimens | Timing_trathistory_paciente_specimens | Date RegimenStarted_trathistory_paciente_specimens | StandardizedRegimen_trathistory_paciente_specimens | Best Response_trathistory_paciente_specimens | DiagnosisSubtype_df_race_paciente_specimens | Self-ReportedRace_df_race_paciente_specimens | Self-ReportedEthnicity_df_race_paciente_specimens | %European(CEU)_df_race_paciente_specimens | %Native and LatinAmerican (NA)_df_race_paciente_specimens | %West African(YRI)_df_race_paciente_specimens | InferredAncestry_df_race_paciente_specimens | BiologicalSex_df_pinfo_paciente_specimens | DiagnosisSubtype_df_pinfo_paciente_specimens | Age atDiagnosis_df_pinfo_paciente_specimens | %European(CEU)_df_pinfo_paciente_specimens | %Native and LatinAmerican (NA)_df_pinfo_paciente_specimens | %West African(YRI)_df_pinfo_paciente_specimens | AdditionalMedicalHistory_df_pinfo_paciente_specimens | Date ofDiagnosis_df_pinfo_paciente_specimens | Ethnicity_df_pinfo_paciente_specimens | Grade StageInformation_df_pinfo_paciente_specimens | Has KnownMetastaticDisease_df_pinfo_paciente_specimens | Has Smoked100 Cigarettes_df_pinfo_paciente_specimens | InferredAncestry_df_pinfo_paciente_specimens | Molecular andIHC Data_df_pinfo_paciente_specimens | Occupation_df_pinfo_paciente_specimens | PatientNotes_df_pinfo_paciente_specimens | Race_df_pinfo_paciente_specimens | Specimen ID | BiopsySite_specimen_specimens | DiagnosisSubtype_specimen_specimens | PDX GrowthCurve Avail_specimen_specimens | Consensus Whole ExomeSequence Avail_specimen_specimens | MSI Status_specimen_specimens | CollectionDate_specimen_specimens | Human PathogenTesting Summary_specimen_specimens | Able to ViablyPassage in nude mice_specimen_specimens | Age atSampling_specimen_specimens | ModelNotes_specimen_specimens | ProvidedTissue Origin_specimen_specimens | Sample ID_samples | DiagnosisSubtype_samples | Patient/OriginatingSpecimen_samples | Passage_samples | PathologyAvail_samples | OncoKB Cancer GenePanel Data Avail_samples | Whole ExomeSequence Avail_samples | RNASeqAvail_samples | PDM Type_samples | Sample ID_gene | HugoSymbol_gene | Chr_gene | Chr End_gene | Chr Start_gene | HGVS ProteinChange_gene | HGVS cDNAChange_gene | Total Reads_gene | Variant AlleleFrequency_gene | VariantClass_gene | MutationEffect_gene | Oncogenicity_gene | Existing Variant_gene | DiagnosisSubtype_pathology | Sample ID_pathology | Patient/OriginatingSpecimen_pathology | Passage_pathology | PDM Type_pathology | Tumor Grade_pathology | Tumor Content_pathology | Necrosis_pathology | Stromal_pathology | Inflammatory Cell_pathology | Pathology Notes_pathology | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0 | 111316 | epithelioid type | Current | 08/2021 | Ripretinib | NaN | epithelioid type | White | Not Hispanic or Latino | 100 | 0 | 0 | European (CEU) | Male | epithelioid type | 58 | 100 | 0 | 0 | Final Pathology: Dx confirmed; mitotic rate is 47/30 HPF; treatment effect present w/central necrosis. | 07/2020 | Not Hispanic or Latino | Grade, TNM (Clinical) | Yes | No | European (CEU) | IHC: DOG1+, CD117+; S100-, CK AE1/AE3- | Engineer | Tumor Grade/Stage: cM0 (at diagnosis); high grade \nLocation of known metastasis: liver, jejunum, ileum | White | 319-R | Liver [central] | epithelioid type | Yes | Yes | MSI-Stable | 11/2021 | Negative | Yes | 59 | PDX IHC/Path: CD34+ (diffusely), SMA+ (rare cells) | Metastatic Site | AH5 | epithelioid type | No | 0.0 | Yes | No | No | No | PDX | AH5Q86T81 | KIT | chr4 | 55593654.0 | 55593601.0 | p.Q556_T574delinsP | c.1667_1720del | 487.0 | 0.2813 | In_Frame_Del | Gain-of-function | Oncogenic | NaN | epithelioid type | AH5 | No | 0.0 | PDX | <Unknown> | 95.0 | 0.0 | 5.0 | Absent/No Inflammation | Gastrointestinal stromal tumor (GIST), epithelioid.\nThe tumor is composed of nests of rounded epithelioid cells with clear to eosinophilic cytoplasm showing mild to moderate pleomorphism with no spindle type cells. Rare mitosis observed. The tumor is diffusely positive for CD34, and rare cells are positive for SMA. Conventional grading of GIST is not done.\n |
| 1 | 111316 | epithelioid type | Current | 08/2021 | Ripretinib | NaN | epithelioid type | White | Not Hispanic or Latino | 100 | 0 | 0 | European (CEU) | Male | epithelioid type | 58 | 100 | 0 | 0 | Final Pathology: Dx confirmed; mitotic rate is 47/30 HPF; treatment effect present w/central necrosis. | 07/2020 | Not Hispanic or Latino | Grade, TNM (Clinical) | Yes | No | European (CEU) | IHC: DOG1+, CD117+; S100-, CK AE1/AE3- | Engineer | Tumor Grade/Stage: cM0 (at diagnosis); high grade \nLocation of known metastasis: liver, jejunum, ileum | White | 319-R | Liver [central] | epithelioid type | Yes | Yes | MSI-Stable | 11/2021 | Negative | Yes | 59 | PDX IHC/Path: CD34+ (diffusely), SMA+ (rare cells) | Metastatic Site | AH5 | epithelioid type | No | 0.0 | Yes | No | No | No | PDX | AH5Q86T81 | KIT | chr4 | 55593654.0 | 55593601.0 | p.Q556_T574delinsP | c.1667_1720del | 487.0 | 0.2813 | In_Frame_Del | Gain-of-function | Oncogenic | NaN | epithelioid type | AH5Q86T81 | No | 2.0 | PDX | <Unknown> | 85.0 | 10.0 | 5.0 | Absent/No Inflammation | Gastrointestinal stromal tumor (GIST), epithelioid.\nThe tumor is composed of nests of rounded epithelioid cells with clear to eosinophilic cytoplasm showing mild to moderate pleomorphism with no spindle type cells. Rare mitosis observed. A previous passage of the tumor was positive for CD34. \nConventional grading of GIST is not done. |
| 2 | 111316 | epithelioid type | Current | 08/2021 | Ripretinib | NaN | epithelioid type | White | Not Hispanic or Latino | 100 | 0 | 0 | European (CEU) | Male | epithelioid type | 58 | 100 | 0 | 0 | Final Pathology: Dx confirmed; mitotic rate is 47/30 HPF; treatment effect present w/central necrosis. | 07/2020 | Not Hispanic or Latino | Grade, TNM (Clinical) | Yes | No | European (CEU) | IHC: DOG1+, CD117+; S100-, CK AE1/AE3- | Engineer | Tumor Grade/Stage: cM0 (at diagnosis); high grade \nLocation of known metastasis: liver, jejunum, ileum | White | 319-R | Liver [central] | epithelioid type | Yes | Yes | MSI-Stable | 11/2021 | Negative | Yes | 59 | PDX IHC/Path: CD34+ (diffusely), SMA+ (rare cells) | Metastatic Site | AH5 | epithelioid type | No | 0.0 | Yes | No | No | No | PDX | AH5Q86T81 | KIT | chr4 | 55593654.0 | 55593601.0 | p.Q556_T574delinsP | c.1667_1720del | 487.0 | 0.2813 | In_Frame_Del | Gain-of-function | Oncogenic | NaN | epithelioid type | AH5Q89 | No | 1.0 | PDX | <Unknown> | 85.0 | 0.0 | 15.0 | Absent/No Inflammation | Gastrointestinal stromal tumor (GIST), epithelioid.\nThe tumor is composed of nests of rounded epithelioid cells with clear to eosinophilic cytoplasm showing mild to moderate pleomorphism with no spindle type cells. Rare mitosis observed. The previous passage of the tumor was positive for CD34. \nConventional grading of GIST is not done. |
| 3 | 111316 | epithelioid type | Current | 08/2021 | Ripretinib | NaN | epithelioid type | White | Not Hispanic or Latino | 100 | 0 | 0 | European (CEU) | Male | epithelioid type | 58 | 100 | 0 | 0 | Final Pathology: Dx confirmed; mitotic rate is 47/30 HPF; treatment effect present w/central necrosis. | 07/2020 | Not Hispanic or Latino | Grade, TNM (Clinical) | Yes | No | European (CEU) | IHC: DOG1+, CD117+; S100-, CK AE1/AE3- | Engineer | Tumor Grade/Stage: cM0 (at diagnosis); high grade \nLocation of known metastasis: liver, jejunum, ileum | White | 319-R | Liver [central] | epithelioid type | Yes | Yes | MSI-Stable | 11/2021 | Negative | Yes | 59 | PDX IHC/Path: CD34+ (diffusely), SMA+ (rare cells) | Metastatic Site | AH5 | epithelioid type | No | 0.0 | Yes | No | No | No | PDX | AH5Q86T81 | KIT | chr4 | 55593654.0 | 55593601.0 | p.Q556_T574delinsP | c.1667_1720del | 487.0 | 0.2813 | In_Frame_Del | Gain-of-function | Oncogenic | NaN | epithelioid type | AH6T26 | No | 1.0 | PDX | <Unknown> | 90.0 | 0.0 | 10.0 | Absent/No Inflammation | Gastrointestinal stromal tumor (GIST), epithelioid.\nThe tumor is composed of nests of rounded epithelioid cells with clear to eosinophilic cytoplasm showing mild to moderate pleomorphism with no spindle type cells. Rare mitosis observed. The tumor is diffusely positive for CD34, and rare cells are positive for SMA. Conventional grading of GIST is not done. |
| 4 | 111316 | epithelioid type | Current | 08/2021 | Ripretinib | NaN | epithelioid type | White | Not Hispanic or Latino | 100 | 0 | 0 | European (CEU) | Male | epithelioid type | 58 | 100 | 0 | 0 | Final Pathology: Dx confirmed; mitotic rate is 47/30 HPF; treatment effect present w/central necrosis. | 07/2020 | Not Hispanic or Latino | Grade, TNM (Clinical) | Yes | No | European (CEU) | IHC: DOG1+, CD117+; S100-, CK AE1/AE3- | Engineer | Tumor Grade/Stage: cM0 (at diagnosis); high grade \nLocation of known metastasis: liver, jejunum, ileum | White | 319-R | Liver [central] | epithelioid type | Yes | Yes | MSI-Stable | 11/2021 | Negative | Yes | 59 | PDX IHC/Path: CD34+ (diffusely), SMA+ (rare cells) | Metastatic Site | AH5 | epithelioid type | No | 0.0 | Yes | No | No | No | PDX | AH5Q86T81 | KIT | chr4 | 55593654.0 | 55593601.0 | p.Q556_T574delinsP | c.1667_1720del | 487.0 | 0.2813 | In_Frame_Del | Gain-of-function | Oncogenic | NaN | epithelioid type | AH6T28 | No | 1.0 | PDX | <Unknown> | 90.0 | 0.0 | 10.0 | Absent/No Inflammation | Gastrointestinal stromal tumor (GIST), epithelioid.\nThe tumor is composed of nests of rounded epithelioid cells with clear to eosinophilic cytoplasm showing mild to moderate pleomorphism with no spindle type cells. Rare mitosis observed. The tumor is diffusely positive for CD34, and rare cells are positive for SMA. Conventional grading of GIST is not done. |
| 5 | 111316 | epithelioid type | Current | 08/2021 | Ripretinib | NaN | epithelioid type | White | Not Hispanic or Latino | 100 | 0 | 0 | European (CEU) | Male | epithelioid type | 58 | 100 | 0 | 0 | Final Pathology: Dx confirmed; mitotic rate is 47/30 HPF; treatment effect present w/central necrosis. | 07/2020 | Not Hispanic or Latino | Grade, TNM (Clinical) | Yes | No | European (CEU) | IHC: DOG1+, CD117+; S100-, CK AE1/AE3- | Engineer | Tumor Grade/Stage: cM0 (at diagnosis); high grade \nLocation of known metastasis: liver, jejunum, ileum | White | 319-R | Liver [central] | epithelioid type | Yes | Yes | MSI-Stable | 11/2021 | Negative | Yes | 59 | PDX IHC/Path: CD34+ (diffusely), SMA+ (rare cells) | Metastatic Site | AH5 | epithelioid type | No | 0.0 | Yes | No | No | No | PDX | AH5Q86T81 | KIT | chr4 | 55593654.0 | 55593601.0 | p.Q556_T574delinsP | c.1667_1720del | 487.0 | 0.2813 | In_Frame_Del | Gain-of-function | Oncogenic | NaN | epithelioid type | AH8 | No | 0.0 | PDX | <Unknown> | 95.0 | 0.0 | 5.0 | Absent/No Inflammation | Gastrointestinal stromal tumor (GIST), epithelioid.\nThe tumor is composed of nests of rounded epithelioid cells with clear to eosinophilic cytoplasm showing mild to moderate pleomorphism with no spindle type cells. Rare mitosis observed. The tumor is diffusely positive for CD34 in another passage. Conventional grading of GIST is not done. |
| 6 | 111316 | epithelioid type | Current | 08/2021 | Ripretinib | NaN | epithelioid type | White | Not Hispanic or Latino | 100 | 0 | 0 | European (CEU) | Male | epithelioid type | 58 | 100 | 0 | 0 | Final Pathology: Dx confirmed; mitotic rate is 47/30 HPF; treatment effect present w/central necrosis. | 07/2020 | Not Hispanic or Latino | Grade, TNM (Clinical) | Yes | No | European (CEU) | IHC: DOG1+, CD117+; S100-, CK AE1/AE3- | Engineer | Tumor Grade/Stage: cM0 (at diagnosis); high grade \nLocation of known metastasis: liver, jejunum, ileum | White | 319-R | Liver [central] | epithelioid type | Yes | Yes | MSI-Stable | 11/2021 | Negative | Yes | 59 | PDX IHC/Path: CD34+ (diffusely), SMA+ (rare cells) | Metastatic Site | AH5 | epithelioid type | No | 0.0 | Yes | No | No | No | PDX | AH5Q86T81 | KIT | chr4 | 55593654.0 | 55593601.0 | p.Q556_T574delinsP | c.1667_1720del | 487.0 | 0.2813 | In_Frame_Del | Gain-of-function | Oncogenic | NaN | epithelioid type | AH8Q94 | No | 1.0 | PDX | <Unknown> | 95.0 | 0.0 | 5.0 | Absent/No Inflammation | Gastrointestinal stromal tumor (GIST), epithelioid.\nThe tumor is composed of nests of rounded epithelioid cells with clear to eosinophilic cytoplasm showing mild to moderate pleomorphism with no spindle type cells. Rare mitosis observed. Another passage of the tumor was positive for CD34. \nConventional grading of GIST is not done. |
| 7 | 111316 | epithelioid type | Current | 08/2021 | Ripretinib | NaN | epithelioid type | White | Not Hispanic or Latino | 100 | 0 | 0 | European (CEU) | Male | epithelioid type | 58 | 100 | 0 | 0 | Final Pathology: Dx confirmed; mitotic rate is 47/30 HPF; treatment effect present w/central necrosis. | 07/2020 | Not Hispanic or Latino | Grade, TNM (Clinical) | Yes | No | European (CEU) | IHC: DOG1+, CD117+; S100-, CK AE1/AE3- | Engineer | Tumor Grade/Stage: cM0 (at diagnosis); high grade \nLocation of known metastasis: liver, jejunum, ileum | White | 319-R | Liver [central] | epithelioid type | Yes | Yes | MSI-Stable | 11/2021 | Negative | Yes | 59 | PDX IHC/Path: CD34+ (diffusely), SMA+ (rare cells) | Metastatic Site | AH5 | epithelioid type | No | 0.0 | Yes | No | No | No | PDX | AH5Q86T81 | KIT | chr4 | 55593654.0 | 55593601.0 | p.Q556_T574delinsP | c.1667_1720del | 487.0 | 0.2813 | In_Frame_Del | Gain-of-function | Oncogenic | NaN | epithelioid type | AH9 | No | 0.0 | PDX | <Unknown> | 95.0 | 0.0 | 5.0 | Absent/No Inflammation | Gastrointestinal stromal tumor (GIST), epithelioid.\nThe tumor is composed of nests of rounded epithelioid cells with clear to eosinophilic cytoplasm showing mild to moderate pleomorphism with no spindle type cells. Rare mitosis observed. The tumor is diffusely positive for CD34 in another passage. Conventional grading of GIST is not done. |
| 8 | 111316 | epithelioid type | Current | 08/2021 | Ripretinib | NaN | epithelioid type | White | Not Hispanic or Latino | 100 | 0 | 0 | European (CEU) | Male | epithelioid type | 58 | 100 | 0 | 0 | Final Pathology: Dx confirmed; mitotic rate is 47/30 HPF; treatment effect present w/central necrosis. | 07/2020 | Not Hispanic or Latino | Grade, TNM (Clinical) | Yes | No | European (CEU) | IHC: DOG1+, CD117+; S100-, CK AE1/AE3- | Engineer | Tumor Grade/Stage: cM0 (at diagnosis); high grade \nLocation of known metastasis: liver, jejunum, ileum | White | 319-R | Liver [central] | epithelioid type | Yes | Yes | MSI-Stable | 11/2021 | Negative | Yes | 59 | PDX IHC/Path: CD34+ (diffusely), SMA+ (rare cells) | Metastatic Site | AH5 | epithelioid type | No | 0.0 | Yes | No | No | No | PDX | AH5Q86T81 | KIT | chr4 | 55593654.0 | 55593601.0 | p.Q556_T574delinsP | c.1667_1720del | 487.0 | 0.2813 | In_Frame_Del | Gain-of-function | Oncogenic | NaN | epithelioid type | Originator | Yes | NaN | Patient/Originator Specimen | <Unknown> | 40.0 | 50.0 | 10.0 | Absent/No Inflammation | Gastrointestinal stromal tumor (GIST), epithelioid.\nThe tumor is composed of nests of rounded epithelioid cells with clear to eosinophilic cytoplasm showing mild to moderate pleomorphism with no spindle type cells. Rare mitosis observed. The tumor is diffusely positive for CD34, and rare cells are positive for SMA. Conventional grading of GIST is not done. |
| 9 | 111316 | epithelioid type | Current | 08/2021 | Ripretinib | NaN | epithelioid type | White | Not Hispanic or Latino | 100 | 0 | 0 | European (CEU) | Male | epithelioid type | 58 | 100 | 0 | 0 | Final Pathology: Dx confirmed; mitotic rate is 47/30 HPF; treatment effect present w/central necrosis. | 07/2020 | Not Hispanic or Latino | Grade, TNM (Clinical) | Yes | No | European (CEU) | IHC: DOG1+, CD117+; S100-, CK AE1/AE3- | Engineer | Tumor Grade/Stage: cM0 (at diagnosis); high grade \nLocation of known metastasis: liver, jejunum, ileum | White | 319-R | Liver [central] | epithelioid type | Yes | Yes | MSI-Stable | 11/2021 | Negative | Yes | 59 | PDX IHC/Path: CD34+ (diffusely), SMA+ (rare cells) | Metastatic Site | AH5 | epithelioid type | No | 0.0 | Yes | No | No | No | PDX | AH5Q86T81 | KIT | chr4 | 55599332.0 | 55599332.0 | p.D820Y | c.2458G>T | 501.0 | 0.5210 | Missense_Mutation | Inconclusive | Resistance | CM023092,KinMutBase_KIT_DNA:g.76151G>T,COSM12710,COSM17947,COSM22379 | epithelioid type | AH5 | No | 0.0 | PDX | <Unknown> | 95.0 | 0.0 | 5.0 | Absent/No Inflammation | Gastrointestinal stromal tumor (GIST), epithelioid.\nThe tumor is composed of nests of rounded epithelioid cells with clear to eosinophilic cytoplasm showing mild to moderate pleomorphism with no spindle type cells. Rare mitosis observed. The tumor is diffusely positive for CD34, and rare cells are positive for SMA. Conventional grading of GIST is not done.\n |
| Patient ID | DiagnosisSubtype_trathistory_paciente_specimens | Timing_trathistory_paciente_specimens | Date RegimenStarted_trathistory_paciente_specimens | StandardizedRegimen_trathistory_paciente_specimens | Best Response_trathistory_paciente_specimens | DiagnosisSubtype_df_race_paciente_specimens | Self-ReportedRace_df_race_paciente_specimens | Self-ReportedEthnicity_df_race_paciente_specimens | %European(CEU)_df_race_paciente_specimens | %Native and LatinAmerican (NA)_df_race_paciente_specimens | %West African(YRI)_df_race_paciente_specimens | InferredAncestry_df_race_paciente_specimens | BiologicalSex_df_pinfo_paciente_specimens | DiagnosisSubtype_df_pinfo_paciente_specimens | Age atDiagnosis_df_pinfo_paciente_specimens | %European(CEU)_df_pinfo_paciente_specimens | %Native and LatinAmerican (NA)_df_pinfo_paciente_specimens | %West African(YRI)_df_pinfo_paciente_specimens | AdditionalMedicalHistory_df_pinfo_paciente_specimens | Date ofDiagnosis_df_pinfo_paciente_specimens | Ethnicity_df_pinfo_paciente_specimens | Grade StageInformation_df_pinfo_paciente_specimens | Has KnownMetastaticDisease_df_pinfo_paciente_specimens | Has Smoked100 Cigarettes_df_pinfo_paciente_specimens | InferredAncestry_df_pinfo_paciente_specimens | Molecular andIHC Data_df_pinfo_paciente_specimens | Occupation_df_pinfo_paciente_specimens | PatientNotes_df_pinfo_paciente_specimens | Race_df_pinfo_paciente_specimens | Specimen ID | BiopsySite_specimen_specimens | DiagnosisSubtype_specimen_specimens | PDX GrowthCurve Avail_specimen_specimens | Consensus Whole ExomeSequence Avail_specimen_specimens | MSI Status_specimen_specimens | CollectionDate_specimen_specimens | Human PathogenTesting Summary_specimen_specimens | Able to ViablyPassage in nude mice_specimen_specimens | Age atSampling_specimen_specimens | ModelNotes_specimen_specimens | ProvidedTissue Origin_specimen_specimens | Sample ID_samples | DiagnosisSubtype_samples | Patient/OriginatingSpecimen_samples | Passage_samples | PathologyAvail_samples | OncoKB Cancer GenePanel Data Avail_samples | Whole ExomeSequence Avail_samples | RNASeqAvail_samples | PDM Type_samples | Sample ID_gene | HugoSymbol_gene | Chr_gene | Chr End_gene | Chr Start_gene | HGVS ProteinChange_gene | HGVS cDNAChange_gene | Total Reads_gene | Variant AlleleFrequency_gene | VariantClass_gene | MutationEffect_gene | Oncogenicity_gene | Existing Variant_gene | DiagnosisSubtype_pathology | Sample ID_pathology | Patient/OriginatingSpecimen_pathology | Passage_pathology | PDM Type_pathology | Tumor Grade_pathology | Tumor Content_pathology | Necrosis_pathology | Stromal_pathology | Inflammatory Cell_pathology | Pathology Notes_pathology | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2723 | 949853 | spindle type | Prior | NaN | Treatment naive | NaN | spindle type | White | Not Hispanic or Latino | 100 | 0 | 0 | European (CEU) | Male | spindle type | 39 | 100 | 0 | 0 | Final Pathology: Stomach - Dx confirmed, predominantly spindle-cell type. Mitotic count: 80 per 5mm2. Liver: Metastatic gastrointestinal stromal sarcoma. | 10/2015 | Not Hispanic or Latino | None Provided | Yes | Yes | European (CEU) | IHC: DOG1+, CD117+, and PDGFR+ consistent with a gastrointestinal stromal tumor (GIST). | Plastics factory worker | Location of know metastases: liver | White | 013-R | Stomach | spindle type | Yes | Yes | MSI-Stable | 01/2016 | Negative\n | Yes | 39 | NaN | Primary | CVYVL3A19 | spindle type | No | 2.0 | Yes | Yes | Yes | Yes | PDX | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | spindle type | CVYVK6 | No | 1.0 | PDX | <Unknown> | 90.0 | 0.0 | 0.0 | <Unknown> | Spindle cell Gastrointestinal Stromal Tumors (GIST) account for nearly 70% of cases and are composed of cells arranged in short fascicles and whorls. The stroma exhibit areas of myxoid change. The individual cells reveal ill-defined cell borders with ovoid nuclei, fine nuclear chromatin, and inconspicuous nucleoli. The cytoplasm has a pale, eosinophilic, and fibrillary quality. Many gastric spindle cell GISTs show extensive paranuclear vacuolization. The degree of paranuclear vacuolization, however, is much more pronounced in GISTs than it is in smooth muscle tumors. |
| 2724 | 949853 | spindle type | Prior | NaN | Treatment naive | NaN | spindle type | White | Not Hispanic or Latino | 100 | 0 | 0 | European (CEU) | Male | spindle type | 39 | 100 | 0 | 0 | Final Pathology: Stomach - Dx confirmed, predominantly spindle-cell type. Mitotic count: 80 per 5mm2. Liver: Metastatic gastrointestinal stromal sarcoma. | 10/2015 | Not Hispanic or Latino | None Provided | Yes | Yes | European (CEU) | IHC: DOG1+, CD117+, and PDGFR+ consistent with a gastrointestinal stromal tumor (GIST). | Plastics factory worker | Location of know metastases: liver | White | 013-R | Stomach | spindle type | Yes | Yes | MSI-Stable | 01/2016 | Negative\n | Yes | 39 | NaN | Primary | CVYVL3A19 | spindle type | No | 2.0 | Yes | Yes | Yes | Yes | PDX | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | spindle type | CVYVK8 | No | 1.0 | PDX | <Unknown> | 90.0 | 0.0 | 0.0 | <Unknown> | Spindle cell Gastrointestinal Stromal Tumors (GIST) account for nearly 70% of cases and are composed of cells arranged in short fascicles and whorls. The stroma exhibit areas of myxoid change. The individual cells reveal ill-defined cell borders with ovoid nuclei, fine nuclear chromatin, and inconspicuous nucleoli. The cytoplasm has a pale, eosinophilic, and fibrillary quality. Many gastric spindle cell GISTs show extensive paranuclear vacuolization. The degree of paranuclear vacuolization, however, is much more pronounced in GISTs than it is in smooth muscle tumors. |
| 2725 | 949853 | spindle type | Prior | NaN | Treatment naive | NaN | spindle type | White | Not Hispanic or Latino | 100 | 0 | 0 | European (CEU) | Male | spindle type | 39 | 100 | 0 | 0 | Final Pathology: Stomach - Dx confirmed, predominantly spindle-cell type. Mitotic count: 80 per 5mm2. Liver: Metastatic gastrointestinal stromal sarcoma. | 10/2015 | Not Hispanic or Latino | None Provided | Yes | Yes | European (CEU) | IHC: DOG1+, CD117+, and PDGFR+ consistent with a gastrointestinal stromal tumor (GIST). | Plastics factory worker | Location of know metastases: liver | White | 013-R | Stomach | spindle type | Yes | Yes | MSI-Stable | 01/2016 | Negative\n | Yes | 39 | NaN | Primary | CVYVL3A19 | spindle type | No | 2.0 | Yes | Yes | Yes | Yes | PDX | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | spindle type | CVYVL0 | No | 1.0 | PDX | Intermediate grade or moderately differentiated | 85.0 | 0.0 | 15.0 | <Unknown> | Spindle cell Gastrointestinal Stromal Tumors (GIST) account for nearly 70% of cases and are composed of cells arranged in short fascicles and whorls. The stroma exhibit areas of myxoid change. The individual cells reveal ill-defined cell borders with ovoid nuclei, fine nuclear chromatin, and inconspicuous nucleoli. The cytoplasm has a pale, eosinophilic, and fibrillary quality. Many gastric spindle cell GISTs show extensive paranuclear vacuolization. The degree of paranuclear vacuolization, however, is much more pronounced in GISTs than it is in smooth muscle tumors. |
| 2726 | 949853 | spindle type | Prior | NaN | Treatment naive | NaN | spindle type | White | Not Hispanic or Latino | 100 | 0 | 0 | European (CEU) | Male | spindle type | 39 | 100 | 0 | 0 | Final Pathology: Stomach - Dx confirmed, predominantly spindle-cell type. Mitotic count: 80 per 5mm2. Liver: Metastatic gastrointestinal stromal sarcoma. | 10/2015 | Not Hispanic or Latino | None Provided | Yes | Yes | European (CEU) | IHC: DOG1+, CD117+, and PDGFR+ consistent with a gastrointestinal stromal tumor (GIST). | Plastics factory worker | Location of know metastases: liver | White | 013-R | Stomach | spindle type | Yes | Yes | MSI-Stable | 01/2016 | Negative\n | Yes | 39 | NaN | Primary | CVYVL3A19 | spindle type | No | 2.0 | Yes | Yes | Yes | Yes | PDX | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | spindle type | CVYVL3A19 | No | 2.0 | PDX | <Unknown> | 90.0 | 0.0 | 0.0 | <Unknown> | Spindle cell Gastrointestinal Stromal Tumors (GIST) account for nearly 70% of cases and are composed of cells arranged in short fascicles and whorls. The stroma exhibit areas of myxoid change. The individual cells reveal ill-defined cell borders with ovoid nuclei, fine nuclear chromatin, and inconspicuous nucleoli. The cytoplasm has a pale, eosinophilic, and fibrillary quality. Many gastric spindle cell GISTs show extensive paranuclear vacuolization. The degree of paranuclear vacuolization, however, is much more pronounced in GISTs than it is in smooth muscle tumors. |
| 2727 | 949853 | spindle type | Prior | NaN | Treatment naive | NaN | spindle type | White | Not Hispanic or Latino | 100 | 0 | 0 | European (CEU) | Male | spindle type | 39 | 100 | 0 | 0 | Final Pathology: Stomach - Dx confirmed, predominantly spindle-cell type. Mitotic count: 80 per 5mm2. Liver: Metastatic gastrointestinal stromal sarcoma. | 10/2015 | Not Hispanic or Latino | None Provided | Yes | Yes | European (CEU) | IHC: DOG1+, CD117+, and PDGFR+ consistent with a gastrointestinal stromal tumor (GIST). | Plastics factory worker | Location of know metastases: liver | White | 013-R | Stomach | spindle type | Yes | Yes | MSI-Stable | 01/2016 | Negative\n | Yes | 39 | NaN | Primary | ORIGINATOR | spindle type | Yes | NaN | No | Yes | Yes | Yes | Patient/Originator Specimen | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | spindle type | CVV | No | 0.0 | PDX | <Unknown> | 90.0 | 0.0 | 0.0 | <Unknown> | Spindle cell Gastrointestinal Stromal Tumors (GIST) account for nearly 70% of cases and are composed of cells arranged in short fascicles and whorls. The stroma exhibit areas of myxoid change. The individual cells reveal ill-defined cell borders with ovoid nuclei, fine nuclear chromatin, and inconspicuous nucleoli. The cytoplasm has a pale, eosinophilic, and fibrillary quality. Many gastric spindle cell GISTs show extensive paranuclear vacuolization. The degree of paranuclear vacuolization, however, is much more pronounced in GISTs than it is in smooth muscle tumors. |
| 2728 | 949853 | spindle type | Prior | NaN | Treatment naive | NaN | spindle type | White | Not Hispanic or Latino | 100 | 0 | 0 | European (CEU) | Male | spindle type | 39 | 100 | 0 | 0 | Final Pathology: Stomach - Dx confirmed, predominantly spindle-cell type. Mitotic count: 80 per 5mm2. Liver: Metastatic gastrointestinal stromal sarcoma. | 10/2015 | Not Hispanic or Latino | None Provided | Yes | Yes | European (CEU) | IHC: DOG1+, CD117+, and PDGFR+ consistent with a gastrointestinal stromal tumor (GIST). | Plastics factory worker | Location of know metastases: liver | White | 013-R | Stomach | spindle type | Yes | Yes | MSI-Stable | 01/2016 | Negative\n | Yes | 39 | NaN | Primary | ORIGINATOR | spindle type | Yes | NaN | No | Yes | Yes | Yes | Patient/Originator Specimen | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | spindle type | CVY | No | 0.0 | PDX | <Unknown> | 90.0 | 0.0 | 10.0 | <Unknown> | Spindle cell Gastrointestinal Stromal Tumors (GIST) account for nearly 70% of cases and are composed of cells arranged in short fascicles and whorls. The stroma may exhibit areas of myxoid change. The individual cells reveal ill-defined cell borders with ovoid nuclei, fine nuclear chromatin, and inconspicuous nucleoli. The cytoplasm has a pale, eosinophilic, and fibrillary quality. Many gastric spindle cell GISTs show extensive paranuclear vacuolization. The degree of paranuclear vacuolization, however, is much more pronounced in GISTs than it is in smooth muscle tumors. |
| 2729 | 949853 | spindle type | Prior | NaN | Treatment naive | NaN | spindle type | White | Not Hispanic or Latino | 100 | 0 | 0 | European (CEU) | Male | spindle type | 39 | 100 | 0 | 0 | Final Pathology: Stomach - Dx confirmed, predominantly spindle-cell type. Mitotic count: 80 per 5mm2. Liver: Metastatic gastrointestinal stromal sarcoma. | 10/2015 | Not Hispanic or Latino | None Provided | Yes | Yes | European (CEU) | IHC: DOG1+, CD117+, and PDGFR+ consistent with a gastrointestinal stromal tumor (GIST). | Plastics factory worker | Location of know metastases: liver | White | 013-R | Stomach | spindle type | Yes | Yes | MSI-Stable | 01/2016 | Negative\n | Yes | 39 | NaN | Primary | ORIGINATOR | spindle type | Yes | NaN | No | Yes | Yes | Yes | Patient/Originator Specimen | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | spindle type | CVYVK6 | No | 1.0 | PDX | <Unknown> | 90.0 | 0.0 | 0.0 | <Unknown> | Spindle cell Gastrointestinal Stromal Tumors (GIST) account for nearly 70% of cases and are composed of cells arranged in short fascicles and whorls. The stroma exhibit areas of myxoid change. The individual cells reveal ill-defined cell borders with ovoid nuclei, fine nuclear chromatin, and inconspicuous nucleoli. The cytoplasm has a pale, eosinophilic, and fibrillary quality. Many gastric spindle cell GISTs show extensive paranuclear vacuolization. The degree of paranuclear vacuolization, however, is much more pronounced in GISTs than it is in smooth muscle tumors. |
| 2730 | 949853 | spindle type | Prior | NaN | Treatment naive | NaN | spindle type | White | Not Hispanic or Latino | 100 | 0 | 0 | European (CEU) | Male | spindle type | 39 | 100 | 0 | 0 | Final Pathology: Stomach - Dx confirmed, predominantly spindle-cell type. Mitotic count: 80 per 5mm2. Liver: Metastatic gastrointestinal stromal sarcoma. | 10/2015 | Not Hispanic or Latino | None Provided | Yes | Yes | European (CEU) | IHC: DOG1+, CD117+, and PDGFR+ consistent with a gastrointestinal stromal tumor (GIST). | Plastics factory worker | Location of know metastases: liver | White | 013-R | Stomach | spindle type | Yes | Yes | MSI-Stable | 01/2016 | Negative\n | Yes | 39 | NaN | Primary | ORIGINATOR | spindle type | Yes | NaN | No | Yes | Yes | Yes | Patient/Originator Specimen | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | spindle type | CVYVK8 | No | 1.0 | PDX | <Unknown> | 90.0 | 0.0 | 0.0 | <Unknown> | Spindle cell Gastrointestinal Stromal Tumors (GIST) account for nearly 70% of cases and are composed of cells arranged in short fascicles and whorls. The stroma exhibit areas of myxoid change. The individual cells reveal ill-defined cell borders with ovoid nuclei, fine nuclear chromatin, and inconspicuous nucleoli. The cytoplasm has a pale, eosinophilic, and fibrillary quality. Many gastric spindle cell GISTs show extensive paranuclear vacuolization. The degree of paranuclear vacuolization, however, is much more pronounced in GISTs than it is in smooth muscle tumors. |
| 2731 | 949853 | spindle type | Prior | NaN | Treatment naive | NaN | spindle type | White | Not Hispanic or Latino | 100 | 0 | 0 | European (CEU) | Male | spindle type | 39 | 100 | 0 | 0 | Final Pathology: Stomach - Dx confirmed, predominantly spindle-cell type. Mitotic count: 80 per 5mm2. Liver: Metastatic gastrointestinal stromal sarcoma. | 10/2015 | Not Hispanic or Latino | None Provided | Yes | Yes | European (CEU) | IHC: DOG1+, CD117+, and PDGFR+ consistent with a gastrointestinal stromal tumor (GIST). | Plastics factory worker | Location of know metastases: liver | White | 013-R | Stomach | spindle type | Yes | Yes | MSI-Stable | 01/2016 | Negative\n | Yes | 39 | NaN | Primary | ORIGINATOR | spindle type | Yes | NaN | No | Yes | Yes | Yes | Patient/Originator Specimen | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | spindle type | CVYVL0 | No | 1.0 | PDX | Intermediate grade or moderately differentiated | 85.0 | 0.0 | 15.0 | <Unknown> | Spindle cell Gastrointestinal Stromal Tumors (GIST) account for nearly 70% of cases and are composed of cells arranged in short fascicles and whorls. The stroma exhibit areas of myxoid change. The individual cells reveal ill-defined cell borders with ovoid nuclei, fine nuclear chromatin, and inconspicuous nucleoli. The cytoplasm has a pale, eosinophilic, and fibrillary quality. Many gastric spindle cell GISTs show extensive paranuclear vacuolization. The degree of paranuclear vacuolization, however, is much more pronounced in GISTs than it is in smooth muscle tumors. |
| 2732 | 949853 | spindle type | Prior | NaN | Treatment naive | NaN | spindle type | White | Not Hispanic or Latino | 100 | 0 | 0 | European (CEU) | Male | spindle type | 39 | 100 | 0 | 0 | Final Pathology: Stomach - Dx confirmed, predominantly spindle-cell type. Mitotic count: 80 per 5mm2. Liver: Metastatic gastrointestinal stromal sarcoma. | 10/2015 | Not Hispanic or Latino | None Provided | Yes | Yes | European (CEU) | IHC: DOG1+, CD117+, and PDGFR+ consistent with a gastrointestinal stromal tumor (GIST). | Plastics factory worker | Location of know metastases: liver | White | 013-R | Stomach | spindle type | Yes | Yes | MSI-Stable | 01/2016 | Negative\n | Yes | 39 | NaN | Primary | ORIGINATOR | spindle type | Yes | NaN | No | Yes | Yes | Yes | Patient/Originator Specimen | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | spindle type | CVYVL3A19 | No | 2.0 | PDX | <Unknown> | 90.0 | 0.0 | 0.0 | <Unknown> | Spindle cell Gastrointestinal Stromal Tumors (GIST) account for nearly 70% of cases and are composed of cells arranged in short fascicles and whorls. The stroma exhibit areas of myxoid change. The individual cells reveal ill-defined cell borders with ovoid nuclei, fine nuclear chromatin, and inconspicuous nucleoli. The cytoplasm has a pale, eosinophilic, and fibrillary quality. Many gastric spindle cell GISTs show extensive paranuclear vacuolization. The degree of paranuclear vacuolization, however, is much more pronounced in GISTs than it is in smooth muscle tumors. |